FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC920860_ssr366 microsatellite FC920860_ssr366:366..377. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15313 contig Ccv1_Contig15313:14..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 251.521 bits (641), Expect = 3.079e-66
Identity = 125/230 (54.35%), Postives = 160/230 (69.57%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KFY+ FSKNLKLG+HEDS N+ KLA+LLR++++ SGDE  SL DYV RMKE Q  IY+ITGES   V+NS F+E++KK+G+EV+YM + IDEY + QLKE++GK+LVS T                          CKV+K VL                PCC+VT +YGW+ANMERIMKAQALRD+S  GYM+ KK +EINP++ I+E LR+RA+ADKNDK+VKDLV+L
Sbjct:  416 KFYDQFSKNLKLGVHEDSQNRQKLADLLRFNTSASGDEYCSLNDYVGRMKENQTQIYFITGESIDQVKNSAFVERVKKRGFEVIYMTEPIDEYVIQQLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFENLCKVMKSVLESKVEKVMVSNRLVDSPCCIVTSQYGWSANMERIMKAQALRDSSAMGYMAGKKHLEINPDHAIIETLRQRAEADKNDKAVKDLVIL 645          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.528e-65
Identity = 118/230 (51.30%), Postives = 158/230 (68.70%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KFY+ FSKNLKLG+HEDS N+ KLA+ LR+H++ SGD+  SL DYV+RMK+ Q  +Y+ITGESK  V NS F+E++K +G+EV+YM + IDEY +  LKE++GK+LVS T                          CK++K +L                PCC+VT ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E LR++ADADKNDK+VKDLV+L
Sbjct:  421 KFYDQFSKNLKLGVHEDSNNRAKLADFLRFHTSASGDDFCSLADYVSRMKDNQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVIL 650          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.404e-65
Identity = 118/230 (51.30%), Postives = 157/230 (68.26%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KFY+ FSKNLKLG+HEDS N+ KLA+ LR+H++ SGD+  SL DYV+RMKE Q  +Y+ITGESK  V NS F+E++K +G+EV+YM + IDEY +  LKE++GK+LVS T                          CK++  +L                PCC+VT ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E LR++ADADKNDK+VKDLV+L
Sbjct:  420 KFYDQFSKNLKLGVHEDSNNRAKLADFLRFHTSASGDDFCSLSDYVSRMKENQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDDAEKKKREEDKAKFESLCKLMNAILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVIL 649          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.689e-64
Identity = 120/230 (52.17%), Postives = 158/230 (68.70%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KFYE FSKN+KLGIHEDSTN+ KL ELLR+HS++SG+E+T+LKDYVTRMKEGQ  IYY+TG+SKK +E SPF+E+ +++G EVL+M D IDEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A+ME+IM+ QALRD+SM+ YM  KKTMEIN  + I++EL++R +AD+NDK+ KDL+ L
Sbjct:  411 KFYEQFSKNVKLGIHEDSTNRKKLMELLRFHSSESGEEMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQARRRGMEVLFMTDPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKASYERLCKAMKEVLGDKVEKVVVSDRLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMSAYMMRKKTMEINTTHAIVKELKRRVEADENDKAAKDLIFL 640          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 1.689e-64
Identity = 119/230 (51.74%), Postives = 159/230 (69.13%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            +FYE F KN+KLGIH+D+ N+ KL E +R++S++SG+E+T+LKDYVTRMK GQ  IYYITG+SKK +E+SPF+E+ K++G EVL+M + IDEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A+ME+IM+ QALRD+SMA YM SKKTME+NP +PI++ELR+R DAD+NDK+VKDLV L
Sbjct:  407 QFYEQFGKNIKLGIHQDTANRKKLMEFVRFYSSESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLESSPFIEQAKRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSECLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVDADENDKAVKDLVFL 636          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.207e-64
Identity = 129/231 (55.84%), Postives = 162/231 (70.13%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVKDLVLL 691
            KFY +FSKN+KLGIHEDS N+  LA+LLR++STKSGDE TSL DYVTRM E Q ++YYITGES KAV  SPFL+ LK+KG+EVL++VD IDEYA+ QLKEFEGKKLV  T                           K +K+VLG               PC + TG++GW+ANMERIMKAQALRD SM+ YMSSKKT EI+P++PI++EL+++ +AD +NDK+VK +V L
Sbjct:  408 KFYTAFSKNIKLGIHEDSQNRNTLAKLLRFNSTKSGDEQTSLSDYVTRMPEHQKNMYYITGESIKAVSKSPFLDSLKEKGFEVLFLVDPIDEYAMTQLKEFEGKKLVDIT-KDFELEETEEEKKQREAEEKEYDGLAKALKNVLGDKVEKVVVSHKLVGAPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSPIIKELKQKVEADGENDKTVKSIVQL 637          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.882e-64
Identity = 119/230 (51.74%), Postives = 160/230 (69.57%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            +FYE F KN+KLGIHED+ N+ KL ELLR++ST+SG+ +T+LKDYVTRMK  QN IYYITG+SKK +E+SPF+E+ K++G+EVL+M +  DEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A+ME++M+ QALRD+SMA YM SKKTME+NP++PI++ELR+R +AD+NDK+VKDLV L
Sbjct:  408 QFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEVMTTLKDYVTRMKAEQNSIYYITGDSKKKLESSPFIEQAKRRGFEVLFMTEPYDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKRQREEEKATCEKLCKTMKEVLGDKVEKVTVSERLSTSPCILVTSEFGWSAHMEQMMRNQALRDSSMAQYMMSKKTMELNPKHPIIKELRRRVEADENDKAVKDLVFL 637          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.186e-63
Identity = 118/230 (51.30%), Postives = 157/230 (68.26%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            +FYE F KN+KLGIHED+ N  KL E LR++ST+SG E+T+LKDYVTRMKEGQ  IYYITG+SKK +E+SPF+E+ +++G EVL+M + IDEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A+ME+IM+ QA+RD+SM+ YM SKKTME+NP +PI++ LR+R +AD+NDK+VKDLV L
Sbjct:  160 QFYEQFGKNIKLGIHEDTANPKKLMEFLRFYSTESGLEMTTLKDYVTRMKEGQKSIYYITGDSKKKLESSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKRCKTMKEVLGDKVEKVTVSDRLSTSPCILVTSEFGWSAHMEQIMRNQAVRDSSMSAYMMSKKTMELNPRHPIIKVLRRRVEADENDKAVKDLVFL 389          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.601e-62
Identity = 123/230 (53.48%), Postives = 156/230 (67.83%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVKDLVLL 691
            FY++FSKNLKLGIHED+ N+  LA+LLRY+S  S D+L SL+DY+T+M E Q +IY+ITGESK+AVENSPFLE  + K ++VL+MVD IDEYAV QLKEFEGKKLV+ T                           K +K +LG               PC L TG+YGW+ANMERIMKAQALRD SM+ YMSS+KT EINP++PI+ EL+K+ + +   D+SVKDL  +
Sbjct:  412 FYDAFSKNLKLGIHEDAANRPALAKLLRYNSLNSPDDLISLEDYITKMPEHQKNIYFITGESKQAVENSPFLEIFRAKKFDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLELEETDEEKAAREKLEKEYEEFAKQLKTILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANMERIMKAQALRDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDRSVKDLATI 641          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 236.113 bits (601), Expect = 1.339e-61
Identity = 125/231 (54.11%), Postives = 156/231 (67.53%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVKDLVLL 691
            KFY +FSKN+KLGIHED+ N+  LA+LLRY STKSGDE TSL DYVTRM E Q  IYYITGES KAV  SPFL+ LK+K +EVL++VD IDEYA  QLKEF+GKKLV  T                           K +K++LG               PC + TG++GW+ANMERIMKAQALRD SM+ YMSSKKT EI+P++ I++EL+K+ +AD +ND++VK +  L
Sbjct:  413 KFYSAFSKNIKLGIHEDAQNRQTLAKLLRYQSTKSGDEATSLADYVTRMPEHQKQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDGKKLVDIT-KDFELEETEEEKAEREKEEKEYENLAKSLKNILGDKVEKVVVSHKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSSIIKELKKKVEADGENDRTVKSITQL 642          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HSP83_ANOGA3.079e-6654.35Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HSP83_DROME1.528e-6551.30Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP83_DROAV3.404e-6551.30Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_TRYBB1.689e-6452.17Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP83_LEIIN1.689e-6451.74Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP90_PODAN2.207e-6455.84Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP83_LEIAM2.882e-6451.74Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP83_LEIDO3.186e-6351.30Heat shock protein 83 (Fragment) OS=Leishmania don... [more]
HSP90_SCHPO4.601e-6253.48Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP90_ASPFU1.339e-6154.11Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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