FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC920860_ssr366 microsatellite FC920860_ssr366:366..377. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15313 contig Ccv1_Contig15313:14..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.895e-61
Identity = 126/231 (54.55%), Postives = 154/231 (66.67%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD-ADKNDKSVKDLVLL 691
            KFY +FSKN+KLG+HED+ N+  LA+LLRY+STKS DELTSL DYVTRM E Q +IYYITGES KAVE SPFL+ LK K +EVL++ D IDEYA  QLKEFEGK LV  T                           K +K++LG               P  + TG++GW+ANMERIMKAQALRD+SM+ YMSSKKT EI+P++PI++EL+KR D     DK+VKDL  L
Sbjct:  416 KFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDIT-KDFELEETDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKL 645          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 234.572 bits (597), Expect = 3.895e-61
Identity = 126/231 (54.55%), Postives = 154/231 (66.67%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD-ADKNDKSVKDLVLL 691
            KFY +F+KN+KLG+HED+ N+  LA+LLRY+STKS DELTSL DYVTRM E Q +IYYITGES KAVE SPFL+ LK K +EVL++ D IDEYA  QLKEFEGK LV  T                           K +KD+LG               P  + TG++GW+ANMERIMKAQALRD+SM+ YMSSKKT EI+P++PI++EL+KR D     DK+VKDL  L
Sbjct:  412 KFYSAFAKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDIT-KDFELEETDEEKAEREKEIKEYEPLTKALKDILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTNL 641          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.644e-61
Identity = 124/231 (53.68%), Postives = 155/231 (67.10%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVKDLVLL 691
            +FY +FSKN+KLGIHED+ N+  LA+LLR++STKS +E+TSL DYVTRM E Q +IYYITGES KAVE SPFL+ LK K +EVL+MVD IDEYA+ QLKEFE KKLV  T                           K +KD+LG               P  + TG++GW+ANMERIMKAQALRD +M+ YMSSKKT EI+P +PI++EL+K+ + D   DK+VKDL  L
Sbjct:  413 QFYTAFSKNIKLGIHEDAQNRQSLAKLLRFYSTKSSEEMTSLSDYVTRMPEHQKNIYYITGESIKAVEKSPFLDALKAKNFEVLFMVDPIDEYAMTQLKEFEDKKLVDIT-KDFELEESDEEKAAREKEIKEYEPLTKALKDILGDQVEKVVVSYKLVDAPAAIRTGQFGWSANMERIMKAQALRDTTMSSYMSSKKTFEISPSSPIIKELKKKVETDGAEDKTVKDLTTL 642          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.613e-57
Identity = 120/231 (51.95%), Postives = 152/231 (65.80%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRA-DADKNDKSVKDLVLL 691
            KFY +F+KN+KLGIHEDS N+  LA+LLRY+STKS DE TSL DYVTRM E Q ++Y+ITGES KAVE SPFL+ LK K +EVL++VD IDEYA  QLKEFEGK+LV  T                             +K+VLG               P  + TG++GW+ANMERIMKAQALRD++M+ YM+SKK  EI+P++ I++EL+KR  D    D++VKDL  L
Sbjct:  411 KFYSAFAKNIKLGIHEDSQNRASLAKLLRYNSTKSVDEQTSLADYVTRMPEHQKNVYFITGESIKAVEKSPFLDALKAKNFEVLFLVDPIDEYAFQQLKEFEGKQLVDITKDFELEESEEEKKQREEEIKEFEPLTA-ALKEVLGDQVEKVVVSYKLIDAPAAIRTGQFGWSANMERIMKAQALRDSTMSSYMASKKIFEISPKSAIIKELKKRVEDNGAQDRTVKDLTSL 640          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.420e-49
Identity = 103/198 (52.02%), Postives = 128/198 (64.65%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKT 595
            KFY +FSKN+KLG+HED+ N+  LA+LLRY+STKSGDE TSL DYVTRM E    IYYITGES KAV+ SPFL+ LK+K +EVL++VD  DEYA+ QLKEF+GKKLV  T                           K ++++LG               PC + TG++GW+ANMERIMKAQALRD SM+   SS+ T
Sbjct:  408 KFYSAFSKNIKLGVHEDAQNRPALAKLLRYNSTKSGDETTSLTDYVTRMPEHHKTIYYITGESLKAVQKSPFLDTLKEKNFEVLFLVDPNDEYAMTQLKEFDGKKLVDIT-KDFELEETEEEKKDREAEEKEYEGLAKSLENILGDKVEKVVVSHKLIGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSRRSSRPT 604          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.467e-49
Identity = 97/186 (52.15%), Postives = 123/186 (66.13%), Query Frame = 2
Query:  134 YVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            YV+ MKE Q   YYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTANME+IMKAQALRDNS  GYM +KK +EINP++PIME LR++A+ADKNDK+VKDLV+L
Sbjct:  345 YVSHMKETQKSTYYITGESKEQVANSAFVERVRKQGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKEKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMEQIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVVL 530          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.650e-44
Identity = 97/231 (41.99%), Postives = 132/231 (57.14%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVL-GXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+  F K++KLGI ED+ N+ +LA+LLR+ STKS  +LTSL  Y++RMK GQ DI+YITG SK+ +E SPFLE+L KK YEV+   D +DEY +  L ++E KK  + +                           K  K  L                 PC +VT +YGW++NMERIM++Q L D S   YM  K+ +EINP +PI++ELR+R   D  D+SVK    L
Sbjct:  517 KFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSEGKLTSLDQYISRMKSGQKDIFYITGTSKEQLEKSPFLERLTKKNYEVILFTDPVDEYLMQYLMDYEDKKFQNVS----KEGLKIGKDSKDKELKESFKELTKWWKGALASENVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDAEDESVKQTARL 743          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.644e-43
Identity = 92/230 (40.00%), Postives = 133/230 (57.83%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+  F K++KLGI ED+TN+ +LA+LLR+ S+KS  +L SL +Y++RMK GQ DI+Y+TG SK+ +E SPFLE+L KK YEV+Y  D +DEY +  L ++E KK  + +                           K + D  G               PC +VT +YGW++NME+IM+AQ L D S   YM  K+ +EINP +PI++ELR +   D + + +K    L
Sbjct:  510 KFWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKSDGKLVSLDEYISRMKSGQKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKESFKELTDWWKKAL-DTEG--IDSVKISNRLHNTPCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARL 736          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.663e-43
Identity = 91/230 (39.57%), Postives = 133/230 (57.83%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+  F K++KLGI ED+ N+ +LA+LLR+ +TKS  +LTSL  Y+ RMK+ Q DI+YITG SK+ +E SPFLE+L KKGYEV++  D +DEY +  L ++E KK  + +                               ++                 PC +VT ++GW+ANMERIM++Q L D +   YM  K+ +EINP +PI++EL+ R  +D  D+SVK+   L
Sbjct:  513 KFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTSLDQYIKRMKKSQKDIFYITGSSKEQLEKSPFLERLIKKGYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKVGKDSKDKELKEAFKELTKWW---KGNLASENVDDVKISNRLADTPCVVVTSKFGWSANMERIMQSQTLSDANKQAYMRGKRVLEINPRHPIIKELKDRIASDPEDESVKETAQL 739          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.783e-43
Identity = 91/233 (39.06%), Postives = 134/233 (57.51%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAL---RDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+ NMERIMKAQA    +D S   Y S KKT EINP +P+++++ +R   D++DK+V DL ++
Sbjct:  484 FWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVV 716          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HSP82_YEAST3.895e-6154.55ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST3.895e-6154.55ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP90_CANAL6.644e-6153.68Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSP82_ASHGO2.613e-5751.95Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSP82_AJECA3.420e-4952.02Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
H90B3_HUMAN4.467e-4952.15Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
ENPL_CATRO5.650e-4441.99Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_HORVU1.644e-4340.00Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_ARATH3.663e-4339.57Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_CANFA4.783e-4339.06Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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