FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMA (Chaperone protein clpB OS=Neisseria meningitidis serogroup A GN=clpB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.281e-41 Identity = 79/138 (57.25%), Postives = 109/138 (78.99%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 LTE VRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDF+NTVI+MTSN+G++H+ MG + ++ V+++V++HFRPE++NR+DE+VVF L +R +A++Q+K + RL ++ + LAV+DA Sbjct: 666 LTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHI--QQMGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDA 801
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40 Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL--LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 LTEAVRRRPYS++L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVI+MTSNLG+ + LSG + V+ V+ HFRPE +NRLD+IVVF PL Q++ +AR+Q++ + RLAERG+ L + DA Sbjct: 662 LTEAVRRRPYSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDA 801
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CAUCR (Chaperone protein clpB OS=Caulobacter crescentus GN=clpB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40 Identity = 85/135 (62.96%), Postives = 104/135 (77.04%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAV 409 LTEA+RRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+IIMTSNLGAE+L S G+ ++ R V+ VR HFRPE LNR+DEI++F LS + + R+Q++ V LA+R +ALA+ Sbjct: 660 LTEAIRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLASQEDGE-DVEAVRPMVMNTVRGHFRPEFLNRIDEIILFKRLSRHNMGDIVRIQLQRVEKLLADRRMALAL 793
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_XANCP (Chaperone protein clpB OS=Xanthomonas campestris pv. campestris GN=clpB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.007e-40 Identity = 85/139 (61.15%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL--LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRRRPYS++L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVI+MTSNLG+ + LSG + V+ V+ HFRPE +NRLD+IVVF PL Q++ +AR+Q++ + RLAERG+ L + D Sbjct: 662 LTEAVRRRPYSLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDD 800
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_VIBPA (Chaperone protein clpB OS=Vibrio parahaemolyticus GN=clpB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.007e-40 Identity = 83/137 (60.58%), Postives = 102/137 (74.45%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG+ + + Q + +V+ V KHFRPE LNR+DEIVVF PL E ++ +A +Q++ + RL E+G L V+D Sbjct: 662 LTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQEN-FATLDYQGIKSEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSD 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB2_THEEB (Chaperone protein clpB 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB2 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.007e-40 Identity = 81/139 (58.27%), Postives = 106/139 (76.26%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEA+RRRPY+VVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDFRNTVIIMTSNLG+EH+L + R +VLQ +K+FRPE LNR+D++++F L +L ++A++Q++ V LA++ + L +T A Sbjct: 675 QLTEAIRRRPYAVVLFDEVEKAHPEVFNVLLQVLDDGRITDSQGRTVDFRNTVIIMTSNLGSEHILDLAADDSRYEEMRQRVLQSAQKYFRPEFLNRIDDVILFHGLGRTELAQIAQIQLRRVEKLLADQKIHLRLTPA 813
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_VIBCH (Chaperone protein clpB OS=Vibrio cholerae GN=clpB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.621e-40 Identity = 84/137 (61.31%), Postives = 101/137 (73.72%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG+ + ++ Q ++QV+ V KHFRPE LNR+DE VVF PL E ++ +A +Q+ + RLAER L V D Sbjct: 662 LTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQEN-FARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDD 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.621e-40 Identity = 82/139 (58.99%), Postives = 107/139 (76.98%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR+PYSVVLFDEVEKAH VFNTLLQ+LDDGRLTD GRTVDFRNT+IIMTSN+G+ ++L G+ G + R++V++E+R+HFRPE LNR+DE V+F PL Q+ ++ L + + RLAER + + + D Sbjct: 666 QLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIIIMTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKPLLPAQIARIVELLLGRLRGRLAERKIDIRLGD 804
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 3.423e-40 Identity = 82/137 (59.85%), Postives = 102/137 (74.45%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG+ + + Q ++QV++ V KHFRPE LNR+DE VVF PLS + ++ +A +Q+ + R+ E G L V+D Sbjct: 662 LTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQEN-FAMLDYQGIKEQVMEVVTKHFRPEFLNRVDETVVFHPLSQDHIKSIAAIQLNRLANRMEEHGYQLEVSD 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 7.626e-40 Identity = 77/138 (55.80%), Postives = 104/138 (75.36%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF+NT+IIMTSN+G+ +LL G+ R+ V+ E++ F+PE LNR+D+I++F PLS E ++K+ + ++DV RL ER + L VTD Sbjct: 668 QLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDFKNTIIIMTSNIGSGYLLENKSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSSEGIKKIIDIFLRDVENRLRERNITLEVTD 805 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |