FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_LISMO (Chaperone protein clpB OS=Listeria monocytogenes GN=clpB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.666e-34 Identity = 70/139 (50.36%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+ ++ + ++++ IRLA++ + + ++D Sbjct: 667 QLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLTLADIKGIVEKLVEELQIRLADQEITITISD 804
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_LISMF (Chaperone protein clpB OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.666e-34 Identity = 70/139 (50.36%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+ ++ + ++++ IRLA++ + + ++D Sbjct: 667 QLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLTLADIKGIVEKLVEELQIRLADQEITITISD 804
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_LISIN (Chaperone protein clpB OS=Listeria innocua GN=clpB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.666e-34 Identity = 70/139 (50.36%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+ ++ + ++++ IRLA++ + + ++D Sbjct: 667 QLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLTLADIKGIVEKLVEELQIRLADQEITITISD 804
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_BACSU (Negative regulator of genetic competence clpC/mecB OS=Bacillus subtilis GN=clpC PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.788e-34 Identity = 74/146 (50.68%), Postives = 100/146 (68.49%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQ-------VARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTE VRR+PYSVVL DE+EKAH VFN LLQVL+DGRLTD +GRTVDFRNT++IMTSN+GA L +Q +D+V+ E+++ FRPE +NR+DEI+VF L + L ++ L + RL E+ +++ +TDA Sbjct: 601 QLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDA 746
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.788e-34 Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 QLTEAVRRRPY+VVLFDE+EKAH VF+ LLQVLD+GRLTDG GRTVDFRNT++I+TSNLG+ + +QVL VR F+PE +NRLD++++F+ L+ E+L ++ +Q+ + RLA+R + L V+ Sbjct: 663 QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGG-------------SAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVS 786
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.788e-34 Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 QLTEAVRRRPY+VVLFDE+EKAH VF+ LLQVLD+GRLTDG GRTVDFRNT++I+TSNLG+ + +QVL VR F+PE +NRLD++++F+ L+ E+L ++ +Q+ + RLA+R + L V+ Sbjct: 663 QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGG-------------SAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVS 786
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_WOLPM (Chaperone protein clpB OS=Wolbachia pipientis wMel GN=clpB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.166e-34 Identity = 69/136 (50.74%), Postives = 101/136 (74.26%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAV 409 +LTEAVRRRPY V+LFDE+EKA+ +FN LLQ+LD+GRLTD G+ +DFRNT++I+TSNLGAE +L G + V R++V+Q V+ FRPE LNRLDEI++F L+ + + K+ +Q + LA+R +++++ Sbjct: 660 RLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTSNLGAEIMLKGNVDSV-----RNEVMQIVKSAFRPEFLNRLDEIIIFHSLTRDDIYKIIDVQFSYLQKTLAKRKLSISL 790
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.166e-34 Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTM-------QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRR+PYSVVL DEVEKAH VFN LLQVL+DGRLTD +GR VDFRNTVIIMTSN+GA L + + + +V++E++K FRPE LNR+DE +VF L E ++ + L ++ + RL E+ + L++TD Sbjct: 604 QLTEKVRRKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGASELKRNKYVGFALDNEEKDYKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMVQQLQKRLKEQDLHLSLTD 748
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIN (Chaperone protein clpB OS=Leptospira interrogans GN=clpB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.166e-34 Identity = 69/138 (50.00%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRRRPYS++LFDE+EKA+ VFN LQ+LD+GRLTDG+GR VDF+NTVII+TSN+G+E L S + T + V Q ++KHF+PE LNR+DE+++F ++ + K+A +Q++ + + E G+ ++ T+ Sbjct: 666 QLTEAVRRRPYSLILFDEIEKANPEVFNIFLQILDEGRLTDGKGRNVDFKNTVIILTSNIGSEVLGS---SEYTSEEKERLVEQRLKKHFKPEFLNRIDEVILFHSITDSVIHKIADIQLEGLRQKAKENGLDVSFTN 800
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIC (Chaperone protein clpB OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=clpB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.166e-34 Identity = 69/138 (50.00%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRRRPYS++LFDE+EKA+ VFN LQ+LD+GRLTDG+GR VDF+NTVII+TSN+G+E L S + T + V Q ++KHF+PE LNR+DE+++F ++ + K+A +Q++ + + E G+ ++ T+ Sbjct: 666 QLTEAVRRRPYSLILFDEIEKANPEVFNIFLQILDEGRLTDGKGRNVDFKNTVIILTSNIGSEILGS---SEYTSEEKERLVEQRLKKHFKPEFLNRIDEVILFHSITDSVIHKIADIQLEGLRQKAKENGLDVSFTN 800 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |