FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_WOLSU (Chaperone protein clpB OS=Wolinella succinogenes GN=clpB PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.067e-33 Identity = 69/139 (49.64%), Postives = 99/139 (71.22%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEA+RR+PYSVVLFDE+EKAH VFN LLQVLDDGRLTD +G TVDFRNT+II+TSN+ ++ + M + V E++++F+PE LNRLD+I++F+PL Q+ ++ + + + +L ER + L +T + Sbjct: 664 QLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGVTVDFRNTIIILTSNIASDKI----MENSDKERRESAVKAELKRYFKPEFLNRLDDIIIFNPLGLAQIVEIVEIMFEGIREKLKERQITLELTQS 798
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_PROMA (Chaperone protein clpB OS=Prochlorococcus marinus GN=clpB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.393e-33 Identity = 64/138 (46.38%), Postives = 101/138 (73.19%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QL+EAVRR PYSV+LFDEVEKA+ V N +LQ+LD+GRLTDG+G+ ++F+NT+II+TSN+G+E ++ K ++ + V +++ +F+PE LNRLDE ++F L E L+K+ +LQ+ V RL ++G+ + + + Sbjct: 668 QLSEAVRRNPYSVILFDEVEKANSDVLNIMLQILDEGRLTDGKGKNINFKNTIIILTSNVGSESIIEMTNKKNEYELIEEVVRNQLKNYFKPEFLNRLDEQIIFKSLKKEDLKKIVKLQIDKVKARLKDKGLEIELNE 805
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.819e-33 Identity = 72/149 (48.32%), Postives = 107/149 (71.81%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQ-----------VLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRRRPY+VVLFDE+EKAH VFN +LQ+L+DGRLTD +GRTVDF+NT++IMTSN+G+ + G ++ + D+ V +E++++FRPE LNRLDE++VF L+ +++++A + +K+V RL + + L VT+ Sbjct: 699 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR-RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTE 846
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_MYCLE (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium leprae GN=clpC PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 1.819e-33 Identity = 71/145 (48.97%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGM-------MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRR+P+SVVLFDE+EKAH ++N+LLQVL+DGRLTDGQGRTVDF+NTV+I TSNLG + + G+ + + +V E++KHFRPE LNR+D+I+VF LS +++ ++ L + V +L + + L +T+ Sbjct: 609 QLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFTQGSGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLSRDEIIRMVDLMISRVANQLKVKDMTLELTN 753
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_RICTY (Chaperone protein clpB OS=Rickettsia typhi GN=clpB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.819e-33 Identity = 68/138 (49.28%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 LTE+VRRRPY V+LFDEVEKAH+ +FN +LQ+LD+GRLT+ QG TVDF+NT+I++TSNLGAE L++ + T +V +D+V+Q VR F+PE LNRLDEI++F L+ + + ++Q+ + L ++ + L ++ Sbjct: 661 LTESVRRRPYQVILFDEVEKAHLDIFNIMLQILDEGRLTNSQGITVDFKNTIIVLTSNLGAEILVNQQEDEDTYKV-KDEVMQYVRAVFKPEFLNRLDEIILFHRLNRNNIYDIVKIQLGSLKKILLQQNIILEFNES 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.819e-33 Identity = 71/137 (51.82%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 QLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++I+TSNLG+ + +QV+ VR F+PE +NRLD++++F L +L ++ +Q+ + RLA+R + L V+ Sbjct: 663 QLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTSNLGSGG-------------SEEQVMAAVRSAFKPEFINRLDDVIIFHGLEPGELVQIVDIQLAQLQKRLAQRRLTLEVS 786
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB1_CHLTE (Probable chaperone protein clpB 1 OS=Chlorobium tepidum GN=clpB1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.819e-33 Identity = 68/144 (47.22%), Postives = 100/144 (69.44%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR+P+SVVL DE+EKAH VFN LLQ+LDDGRLTD +GRTV+F+NT+IIMTSN+GA+ + L G + ++++ Q +++ RPE LNR+DE+++F PL+ E LR++ +Q + + + L ++D Sbjct: 234 QLTEAVRRKPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSNIGAQLIQSEMEHLEGRDADAALAGLKEKLFQLLKQQVRPEFLNRIDEVILFTPLTRENLREIVTIQFNRIKETARRQRITLEISD 377
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.819e-33 Identity = 71/149 (47.65%), Postives = 107/149 (71.81%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQ-----------VLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRRRPY+VVLFDE+EKAH VFN +LQ+L+DGRLTD +GRTVDF+NT++IMTSN+G+ + G ++ + D+ V +E++++FRPE LNRL E++VF L+ +++++A + +K+V +RL + + L VT+ Sbjct: 702 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR-RIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTE 849
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: HSP78_SCHPO (Heat shock protein 78, mitochondrial OS=Schizosaccharomyces pombe GN=hsp78 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.376e-33 Identity = 71/139 (51.08%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 +LTEAVRR+PY+V+LFDE+EKAH + N LLQVLD+G LTD QGR VDFR+T+I+MTSNLG++ L++ VT + +RD V+ V+K++ PE LNR+D+ +VF+ LS + L + +++ +V RL +R + L VT+A Sbjct: 595 ELTEAVRRKPYAVLLFDELEKAHHDITNLLLQVLDEGFLTDSQGRKVDFRSTLIVMTSNLGSDILVADPSTTVTPK-SRDAVMDVVQKYYPPEFLNRIDDQIVFNKLSEKNLEDIVNVRLDEVQQRLNDRRIILTVTEA 732
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.376e-33 Identity = 72/149 (48.32%), Postives = 107/149 (71.81%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQ-----------VLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRRRPY+VVLFDE+EKAH VFN +LQ+L+DGRLTD +GRTVDF+NT++IMTSN+G+ + G ++ + D+ V +E++++FRPE LNRLDE++VF L+ +++++A + +K+V RL + + L VT+ Sbjct: 699 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR-RIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTE 846 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |