FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: HLYB_TREHY (Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.154e-30 Identity = 65/144 (45.14%), Postives = 99/144 (68.75%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSG-MMGKVTMQVARDQ------VLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTE VRR+PYS++LFDE+EKAH V N LLQVL++G+LTD GR VDF NT+II+TSNLGA ++ G +G + +D L+E++++F PE LNR+D+I+VF LS E L+ + + +K++ + ER + + +++ Sbjct: 611 LTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNLGARDIVKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVFHTLSKEDLKDIINIMLKELNEAIKERNIVINLSE 754
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: HS104_SCHPO (Heat shock protein 104 OS=Schizosaccharomyces pombe GN=hsp104 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29 Identity = 70/143 (48.95%), Postives = 93/143 (65.03%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMM---GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLA--ERGVALAVTD 415 QLTE +RRRPYSV+LFDE+EKA V LLQVLDDGR+T GQG+ VD +N VIIMTSNLGAE+L + GK+ R+ V+ +R FRPE LNR+ IV+F+ L +R + ++ +V RL R + + V+D Sbjct: 677 QLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQGQVVDAKNAVIIMTSNLGAEYLTTDNESDDGKID-STTREMVMNSIRGFFRPEFLNRISSIVIFNRLRRVDIRNIVENRILEVQKRLQSNHRSIKIEVSD 818
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_LACLA (ATP-dependent Clp protease ATP-binding subunit clpL OS=Lactococcus lactis subsp. lactis GN=clpL PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29 Identity = 71/139 (51.08%), Postives = 89/139 (64.03%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG-AEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 LTE VRR PYSV+L DE+EKA V LLQV+DDGRLTDGQG +DFRNT+IIMTSN G LSG K +Q D++ ++FRPE NRLD IV F L+ + L ++ L + DV LA++ + L VT A Sbjct: 569 LTERVRRNPYSVILLDEIEKADPQVLTLLLQVMDDGRLTDGQGSVIDFRNTIIIMTSNAGFGNEALSG--DKQRVQSLMDKLAPFFAQNFRPEFRNRLDNIVEFSHLTKQDLSQIVDLMLADVQKTLAKKSIKLEVTKA 705
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: HS104_YEAST (Heat shock protein 104 OS=Saccharomyces cerevisiae GN=HSP104 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.551e-29 Identity = 59/128 (46.09%), Postives = 89/128 (69.53%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAE 388 LT ++ +PYSV+LFDEVEKAH V +LQ+LDDGR+T GQG+T+D N ++IMTSNLGAE ++ G + ++ V+ VR+HFRPE LNR+ IV+F+ LS + + K+ +++K++ R + Sbjct: 671 LTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAE-FINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQ 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_MYCGA (Chaperone protein clpB OS=Mycoplasma gallisepticum GN=clpB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.551e-29 Identity = 60/131 (45.80%), Postives = 92/131 (70.23%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGV 397 L++A+R +PY+VVLFDE+EKAH V N LLQ+LDDG+LTD R V+F+NT+IIMTSN+GAEH+L+ K ++E+++ RPELLNR+DE++ F L+ + L +A+ + D+ R+ ++ + Sbjct: 522 LSDAIRTKPYAVVLFDEIEKAHPDVLNILLQILDDGQLTDNHNRLVNFKNTIIIMTSNIGAEHILANNPAK---------TIEELKRKIRPELLNRIDELITFKALNDKDLSAIAQKLLSDLSDRIKKQQI 643
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPE_BACSU (ATP-dependent Clp protease ATP-binding subunit clpE OS=Bacillus subtilis GN=clpE PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29 Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVL-QEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRR PYS+VL DE+EKAH V + LQ+++DGRLTD QGRTV F++TVIIMTSN GA + + + V +Q L + F+PE LNR D I+ F L E L K+ L + ++ LAERG++L VTD Sbjct: 502 QLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNAGAGEKQTKVGFQSDDSVIEEQTLIDSLSMFFKPEFLNRFDSIIEFRSLEKEHLVKIVSLLLGELEETLAERGISLNVTD 640
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_HELPJ (Chaperone protein clpB OS=Helicobacter pylori J99 GN=clpB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR+PYSVVL DEVEKAH VFN LLQVLD+G LTD +G VDF+NT++I+TSN+ + LL + + Q A + + +R+ F+PE LNRLDEI+ F+ L + + + ++V + ERG+ + + + Sbjct: 661 QLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNVASGALLEEDLSEADKQKA---IKESLRQFFKPEFLNRLDEIISFNALDSHAIINIVGILFENVQKKALERGINITLDE 795
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_HELPY (Chaperone protein clpB OS=Helicobacter pylori GN=clpB PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29 Identity = 64/138 (46.38%), Postives = 93/138 (67.39%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR+PYSVVL DEVEKAH VFN LLQVLD+G LTD +G VDF+NT++I+TSN+ + LL + + Q A + + +R+ F+PE LNRLDEI+ F+ L + + + +++ + ERG+ + + + Sbjct: 661 QLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNVASGALLEENLSEAEKQKA---IKESLRQFFKPEFLNRLDEIISFNALDSHAVINIVGILFENIQKKALERGINITLDE 795
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPE_STRPN (ATP-dependent Clp protease ATP-binding subunit clpE OS=Streptococcus pneumoniae GN=clpE PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28 Identity = 66/138 (47.83%), Postives = 85/138 (61.59%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VR PYS++L DEVEKAH V + LQVLDDGRLTDGQGRTV F++ +IIMTSN G + + + + VL E+ F PE +NR D I+ F LS + L ++ L + DV RL+ + L VTD Sbjct: 543 QLTEKVRHNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGIIEFKALSKDNLLQIVELMLADVNKRLSSNNIRLDVTD 680
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CHLMU (Chaperone protein clpB OS=Chlamydia muridarum GN=clpB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.926e-28 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEV----RKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 L+EA+RRRPYSVVLFDE+EKA VFN LLQ+ DDG LTD + R V+ +N + IMTSN+G++ L K T+ V ++ VL V + +F PE +NR+DEI+ F PL+ E + K+ +QM V +RL ER ++L D+ Sbjct: 662 LSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQELADYCAKKGTI-VDKEAVLSVVAPALKNYFSPEFINRIDEILPFVPLTTEDIVKIVGIQMNRVALRLLERRISLTWDDS 802 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |