FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_STRP6 (Probable ATP-dependent Clp protease ATP-binding subunit OS=Streptococcus pyogenes serotype M6 GN=clpC PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.127e-28 Identity = 60/137 (43.80%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTE VRR PY++VL DE+EKA + LLQVLDDGRLTDGQG T++F+NTVII TSN G G+ + + ++ + +FRPE LNR + I+ F+ L E L ++ L + +V A++G++L + D Sbjct: 510 LTERVRRNPYAIVLLDEIEKADPQIITLLLQVLDDGRLTDGQGNTINFKNTVIIATSNAG--------FGQQDTETSESNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEVNQTTAKKGISLTIAD 638
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPN (Chaperone protein clpB OS=Mycoplasma pneumoniae GN=clpB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.696e-28 Identity = 64/131 (48.85%), Postives = 88/131 (67.18%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGV 397 LTEAVRR+PY V+LFDE+EKAH V N LLQVLDDG L D QGR V+F+NT+IIMTSNLG+ ++ M+ RD ++ ++KHFR E +NR+DEIV F L + ++ + + RLA++ + Sbjct: 523 LTEAVRRKPYCVLLFDEIEKAHPDVTNILLQVLDDGTLKDSQGRLVNFKNTMIIMTSNLGSNYI---------MENKRDLAMEALKKHFRAEFINRIDEIVFFSVLQKTTVLEIITNLLDQLNQRLAKQNL 644
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CHLTR (Chaperone protein clpB OS=Chlamydia trachomatis GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.745e-28 Identity = 67/142 (47.18%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEV----RKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 L+EA+RRRPYSVVLFDE+EKA VFN LLQ+ DDG LTD + R V+ +N + IMTSN+G++ L K T+ V ++ VL V + +F PE +NR+D+I+ F PL+ E + K+ +QM V +RL ER ++L D+ Sbjct: 662 LSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQELADYCTKKGTI-VDKEAVLSVVAPALKNYFSPEFINRIDDILPFVPLTTEDIVKIVGIQMNRVALRLLERKISLTWDDS 802
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CHLCV (Chaperone protein clpB OS=Chlamydophila caviae GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.745e-28 Identity = 67/142 (47.18%), Postives = 96/142 (67.61%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEV----RKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 L+EA+RRRPYSVVLFDE+EKA VFN LLQ+ D+G LTD + R V+ +N + IMTSN+G++ L+ K +V+++ VL V +K+F PE +NR+D+I+ F PL+ E + K+ +QM+ V RL ER V L D+ Sbjct: 662 LSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQE-LADYCAKKGSRVSKETVLSVVAPTLKKYFSPEFINRIDDILPFVPLNTEDIVKIVGIQMRRVAQRLLERRVTLTWDDS 802
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAAB (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpL PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.492e-27 Identity = 64/136 (47.06%), Postives = 88/136 (64.71%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G G T Q D ++QE++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGTDQ-EYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMNVS 641
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPE (Chaperone protein clpB OS=Mycoplasma penetrans GN=clpB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.544e-27 Identity = 59/129 (45.74%), Postives = 89/129 (68.99%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAE 388 +L+E +RR+PYSVVL DE+EKAH + N LLQVLD+G L D QGR ++F+NT+IIMTSN+GA +L M+ D +E++ F+PE LNR+DEI+ F+ ++ E +++A+ + D+ RL + Sbjct: 515 ELSEQIRRKPYSVVLLDEIEKAHPDILNVLLQVLDEGTLKDNQGRNINFKNTIIIMTSNVGALYL---------MENKEDMFERELKTSFKPEFLNRIDEIIKFNSITMEFAKEIAQKMLDDLEKRLKD 634
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPE_LACLM (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpE PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.263e-26 Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTE VRR PYS++L DE+EKAH V + LQ+L+DGRLTD QGRTV F++++IIMTSN G + + + + VL ++ F PE +NR D I+ F LS E L K+ L + +V ++ + L+VT A Sbjct: 537 QLTERVRRNPYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASVGFGAAREGRTKSVLGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQA 675
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPE_LACLA (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. lactis GN=clpE PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.263e-26 Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTE VRR PYS++L DE+EKAH V + LQ+L+DGRLTD QGRTV F++++IIMTSN G + + + + VL ++ F PE +NR D I+ F LS E L K+ L + +V ++ + L+VT A Sbjct: 537 QLTERVRRNPYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASVGFGAAREGRTKSVLGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQA 675
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAAW (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MW2) GN=clpL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G G +D ++ E++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGNDAEEKD-IMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVS 641
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAAS (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MSSA476) GN=clpL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G G +D ++ E++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGNDAEEKD-IMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVS 641 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |