FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAAR (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MRSA252) GN=clpL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G + G T + ++ E++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGFGN------GNDTEE---KDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVS 641
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAAN (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain N315) GN=clpL PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G G +D ++ E++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGNDAEEKD-IMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVS 641
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAAM (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpL PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G G +D ++ E++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGNDAEEKD-IMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVS 641
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAAC (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain COL) GN=clpL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G G +D ++ E++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGNDAEEKD-IMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVS 641
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAA8 (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain NCTC 8325) GN=clpL PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G G +D ++ E++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGNDAEEKD-IMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVS 641
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPL_STAA3 (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain USA300) GN=clpL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTE VRR PYSV+LFDE+EKA+ + LLQV+DDG LTDGQG ++F+NT+II TSN G G +D ++ E++K FRPE LNR + IV F L + L+ + L + DV + L ++G+ + V+ Sbjct: 515 LTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGNDAEEKD-IMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVS 641
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CHLPN (Chaperone protein clpB OS=Chlamydia pneumoniae GN=clpB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 63/141 (44.68%), Postives = 91/141 (64.54%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL---LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 L+EA+RRRPYSVVLFDE+EKA V N LLQV DDG LTDG+ R V+ +N + IMTSN+G+ L S ++T + V ++++ PE +NR+DEI+ F PL+ E + K+ +QM+ + RL R + L+ D+ Sbjct: 662 LSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALFIMTSNIGSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDIVKIVGIQMRRIAQRLKARRINLSWDDS 802
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPA_ECOLI (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli (strain K12) GN=clpA PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.396e-25 Identity = 58/136 (42.65%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LT+AV + P++V+L DE+EKAH VFN LLQV+D+G LTD GR DFRN V++MT+N G +G + + D ++E++K F PE NRLD I+ FD LS + + +V + ++ ++L ++GV+L V+ Sbjct: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPA_ECOL6 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O6 GN=clpA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.396e-25 Identity = 58/136 (42.65%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LT+AV + P++V+L DE+EKAH VFN LLQV+D+G LTD GR DFRN V++MT+N G +G + + D ++E++K F PE NRLD I+ FD LS + + +V + ++ ++L ++GV+L V+ Sbjct: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPA_ECO57 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O157:H7 GN=clpA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.396e-25 Identity = 58/136 (42.65%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LT+AV + P++V+L DE+EKAH VFN LLQV+D+G LTD GR DFRN V++MT+N G +G + + D ++E++K F PE NRLD I+ FD LS + + +V + ++ ++L ++GV+L V+ Sbjct: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |