FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_PROFR (Chaperone protein clpB (Fragment) OS=Propionibacterium freudenreichii subsp. shermanii GN=clpB PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.866e-24 Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL 199 QLTEAVRRRPYSVVL DE+EK H VFN LLQVLDDGRLTDGQGRTVDFRN ++IMTSNLG++ ++ Sbjct: 664 QLTEAVRRRPYSVVLLDEIEKVHPDVFNFLLQVLDDGRLTDGQGRTVDFRNVILIMTSNLGSQFMV 729
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPA_RHOBL (ClpA homolog protein OS=Rhodopseudomonas blastica PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.219e-22 Identity = 58/140 (41.43%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQE----VRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LT+ V + P+ V+L DE+EKAH V+N LLQV+D G+LTD GR VDFRN ++IMTSN+GA M K + R++ E V + F PE NRLD ++ F PL E + +V + + +L +R V + +T Sbjct: 579 LTDGVDQHPHCVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAVDFRNVILIMTSNVGAAD-----MAKEAIGFGRERRTGEDTAAVERTFTPEFRNRLDAVISFAPLGREIILQVVEKFVLQLEAQLIDRNVHIELT 713
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPV1_PSEAE (Protein clpV1 OS=Pseudomonas aeruginosa GN=clpV1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.352e-20 Identity = 55/130 (42.31%), Postives = 81/130 (62.31%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVR----KHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRL 382 LTEAVRR+PYSVVL DEVEKAH V QV D G + DG+GR +DF+NT+I++T+N G E +++ + + + + + +R K F P LL RL I + PLS + L+ ++RLQ+ + R+ Sbjct: 697 LTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTE-MIASLCADPELMPEPEAIAKSLREPLLKIFPPALLGRLVTIPYY-PLSDDMLKAISRLQLGRIKKRV 824
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_YEREN (Chaperone protein clpB OS=Yersinia enterocolitica GN=clpB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.013e-20 Identity = 54/130 (41.54%), Postives = 79/130 (60.77%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQ----EVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRL 382 LTEAVRR+PYSVVL DE+EKAH V QV D G++ DG+GR +DF+NT++++TSN+G+E LLS + +D +L E+ K F L R+ ++ + PL L+ + RL + + RL Sbjct: 683 LTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQMEDGEGRFIDFKNTILLLTSNVGSE-LLSNLFADPDTAPDQDGILSALQPELLKVFPAAFLGRV-TVIPYLPLQQSALQHIVRLHLDRIGQRL 810
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_MOUSE (Caseinolytic peptidase B protein homolog OS=Mus musculus GN=Clpb PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.185e-16 Identity = 53/147 (36.05%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG----AEHLLS--------------------GMMGKVTM-QVARDQVLQEVRK-HF-RPELLNRLDEIVVFDPLSHEQLRKVARLQM 361 QLT+ +++ P +VVLFDEV+KAH V +LQ+ D+GRLTDG+G+T+D ++ + IMTSN+ A+H L M K+T+ + ++ V++ + K HF R E L R++EIV F P H +L ++ ++ Sbjct: 408 QLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQMSDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKEL 554
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: ADPR_RHOER (ATP-dependent protease ATP-binding subunit-like protein OS=Rhodococcus erythropolis PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16 Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 29 PYS--VVLFDEVEKAHISVFNTLLQVLDDG--RLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQ---VLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 PY+ +VLFDEVEKA +V LLQVLD+G RL +GQ + + FRN+ + +TSNLG+ + L + +V + R V + + K F PE NR+DE V+ D + +V RL+++ + RLA RG+ + V D+ Sbjct: 146 PYTPGIVLFDEVEKADPTVLRALLQVLDNGELRLANGQQK-ISFRNSYVFLTSNLGSAAVAERRRSHLRQLADRVRIDRPRHGHHLVQRALEKFFDPEFFNRIDETVILDEFDDQTAEQVTRLEIELITTRLARRGIDVEVDDS 288
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_RAT (Caseinolytic peptidase B protein homolog OS=Rattus norvegicus GN=Clpb PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 49/149 (32.89%), Postives = 85/149 (57.05%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG----AEHLLSGMMGKVTMQVARDQVLQE------------------------VRKHF-RPELLNRLDEIVVFDPLSHEQLRKVARLQM 361 QLT+ +++ P +VVLFDEV+KAH V +LQ+ D+GRLTDG+G+T+D ++ + IMTSN+ A+H L + + ++++R+++ + ++ HF R E L R++EIV F P H +L ++ ++ Sbjct: 408 QLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHAL--QLRQEALEMSRNRIAENLGDVQISDKITISKNFKENMIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKEL 554
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_HUMAN (Caseinolytic peptidase B protein homolog OS=Homo sapiens GN=CLPB PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 49/149 (32.89%), Postives = 85/149 (57.05%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG----AEHLLSGMMGKVTMQVARDQVLQE------------------------VRKHF-RPELLNRLDEIVVFDPLSHEQLRKVARLQM 361 QLT+ +++ P +VVLFDEV+KAH V +LQ+ D+GRLTDG+G+T+D ++ + IMTSN+ A+H L + + ++++R+++ + ++ HF R E L R++EIV F P H +L ++ ++ Sbjct: 438 QLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHAL--QLRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKEL 584
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BOVIN (Caseinolytic peptidase B protein homolog OS=Bos taurus GN=CLPB PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 49/149 (32.89%), Postives = 85/149 (57.05%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG----AEHLLSGMMGKVTMQVARDQVLQE------------------------VRKHF-RPELLNRLDEIVVFDPLSHEQLRKVARLQM 361 QLT+ +++ P +VVLFDEV+KAH V +LQ+ D+GRLTDG+G+T+D ++ + IMTSN+ A+H L + + ++++R+++ + ++ HF R E L R++EIV F P H +L ++ ++ Sbjct: 408 QLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHAL--QLRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKEL 554
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: AMIB_PSEAE (ATP-dependent protease ATP-binding subunit-like protein amiB OS=Pseudomonas aeruginosa GN=amiB PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.727e-12 Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2 Query: 38 VVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG-RTVDFRNTVIIMTSNLGAEHL-------------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 +VLFDE+EKA V + LL VLD+G L G RT FRNT++ MTSNL A + L + G+ + V + K F PE +NRLD +V F+ + + + ++ L+++ + RL + L T Sbjct: 168 IVLFDELEKASPEVVHALLNVLDNGLLRVASGERTYHFRNTLVFMTSNLCAHEIQRYDERRQRLPWRLLPVGGERRRRDIDGMVRARLLKTFSPEFVNRLDSVVTFNWIERDVVARLVELEVQRLNRRLEKHRCRLEAT 306 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |