FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BACCR (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 7.626e-40 Identity = 80/140 (57.14%), Postives = 110/140 (78.57%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL+ +++ + +K++ RLA+R + + +TDA Sbjct: 667 QLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHITVELTDA 806
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.960e-40 Identity = 81/137 (59.12%), Postives = 101/137 (73.72%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG+ + + Q ++QV++ V KHFRPE LNR+DE VVF PL + ++ +A +Q+ + R+ E G L V+D Sbjct: 662 LTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQEN-FAMLDYQGIKEQVMEVVTKHFRPEFLNRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPLEVSD 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.301e-39 Identity = 84/138 (60.87%), Postives = 107/138 (77.54%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVI+MTSNLG++H+ S M GK +V ++ V E++ FRPE LNR+DE+VVF L + + +AR+Q+K + RL ++ + L V+DA Sbjct: 668 LTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQS-MAGK-PYEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDA 803
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.301e-39 Identity = 84/138 (60.87%), Postives = 107/138 (77.54%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVI+MTSNLG++H+ S M GK +V ++ V E++ FRPE LNR+DE+VVF L + + +AR+Q+K + RL ++ + L V+DA Sbjct: 668 LTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQS-MAGK-PYEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDA 803
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.301e-39 Identity = 84/138 (60.87%), Postives = 107/138 (77.54%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVI+MTSNLG++H+ S M GK +V ++ V E++ FRPE LNR+DE+VVF L + + +AR+Q+K + RL ++ + L V+DA Sbjct: 668 LTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQS-MAGK-PYEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDVSDA 803
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + + +A++Q+K + RL ERG + ++D Sbjct: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + + +A++Q+K + RL ERG + ++D Sbjct: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + + +A++Q+K + RL ERG + ++D Sbjct: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + + +A++Q+K + RL ERG + ++D Sbjct: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB1_STRAW (Chaperone protein clpB 1 OS=Streptomyces avermitilis GN=clpB1 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.699e-39 Identity = 88/143 (61.54%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARD----QVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVRRRPYSVVL DEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRNT++I+TSNLG++ LSG G Q + + QVL+ VR F+PE LNRLD++VVF L+ ++L ++A+LQ+ + RLA+R + L VTDA Sbjct: 665 QLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILILTSNLGSQ-FLSG-HGPAEPQTSEEEKKRQVLEVVRASFKPEFLNRLDDLVVFSALNRQELERIAKLQIDRLAQRLAQRRLRLEVTDA 805 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |