FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.204e-38 Identity = 78/145 (53.79%), Postives = 108/145 (74.48%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEA+RR+PYSVVLFDE+EKAH VFN LLQVLDDGRLTD +GR V+F+NT+IIMTSN+G+ ++ LSG + ++ + +V+ ++K+ RPE LNR+DE ++F PL+ ++R++ LQ+K V LAE GV L +TDA Sbjct: 659 QLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQMEKLSGSNKEEVIEETKKEVMNMLKKNIRPEFLNRIDETIMFLPLTETEIRQIVLLQIKGVQKMLAENGVELEMTDA 803
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.184e-38 Identity = 80/136 (58.82%), Postives = 99/136 (72.79%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG++ ++ G + +D V+ V +FRPE +NR+DE VVF PL L +A +Q++ + RL ERG + +T Sbjct: 662 LTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD-MIQERFGSLNYDEMKDIVMGIVSHNFRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTIT 796
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.465e-38 Identity = 75/139 (53.96%), Postives = 101/139 (72.66%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QL+EAVRR PYSVVL DEVEKAH VFN LLQVLDDGR+TD QGRTVDFRNTVI+MTSN+G+EH+L + R++V+ +R HFRPE LNR+D+ ++F LS ++ + R+Q+K V L ++ ++ ++ A Sbjct: 670 QLSEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRNTVIVMTSNIGSEHILDVSGDDTQYETMRNRVMDALRSHFRPEFLNRVDDTILFHALSRSEMSHIIRIQLKRVESLLRDQKISFEISPA 808
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 7.138e-38 Identity = 80/137 (58.39%), Postives = 101/137 (73.72%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQG TVDFRNTVIIMTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + + +QM+ + L++R + L + D Sbjct: 662 LTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTVIIMTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLED 797
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_AGRT5 (Chaperone protein clpB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpB PE=3 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 7.138e-38 Identity = 77/137 (56.20%), Postives = 102/137 (74.45%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+IIMTSNLG+E ++ M + R+ V++ VR HFRPE LNR+D+I++F L +++ + +Q+K + LA+R + L + + Sbjct: 664 LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSE-FMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGAIVEIQLKRLVSLLADRKITLELDE 799
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLP_TRYBB (Heat shock protein 100 OS=Trypanosoma brucei brucei GN=HSP100 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.322e-38 Identity = 82/138 (59.42%), Postives = 101/138 (73.19%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRRRP++VVLFDEVEKAH +V+N LLQVLDDGRLTD +GRTVDF NT+I+MTSNLG+EHLL+ + +V R+ VL VR +FRPEL+NRLD+IVVF L E LR V + V RL G ++ + D Sbjct: 659 QLTEPVRRRPHAVVLFDEVEKAHPNVYNVLLQVLDDGRLTDSRGRTVDFSNTIIVMTSNLGSEHLLNPEETNESYEVLRENVLAAVRSYFRPELINRLDDIVVFRRLRTEDLRGVVDNLIAGVNERLKSSGFSVLLDD 796
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.322e-38 Identity = 79/133 (59.40%), Postives = 101/133 (75.94%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVAL 403 LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I+MTSNLG+E+L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ ++ +Q + L +R + L Sbjct: 663 LTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQPEGEDTGAV-REQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVL 794
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_PASMU (Chaperone protein clpB OS=Pasteurella multocida GN=clpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.322e-38 Identity = 82/138 (59.42%), Postives = 100/138 (72.46%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMTSNLG+ HL+ + ++ V+ V +HFRPE +NR+DE VVF PL E +R++A +Q+ + R+ G L TDA Sbjct: 661 LTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS-HLIQ-ENSTLDYPSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDA 796
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.322e-38 Identity = 75/139 (53.96%), Postives = 105/139 (75.54%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVRRRPY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRT+DF+N VIIMTSN+G++ +L + R++V++ ++ HFRPE LNR+D+I++F L +QL + +LQ+ + RLA+R + L +++A Sbjct: 668 QLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQVLDDGRITDSQGRTIDFKNAVIIMTSNIGSDAILRLGGNDAYYEQMREEVMRAMQVHFRPEFLNRVDDIIIFRNLRRDQLAAIVKLQIARLEKRLADRKITLKLSEA 806
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.322e-38 Identity = 79/138 (57.25%), Postives = 104/138 (75.36%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRRRPYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG++ + G + V + +++ F+PE LNR+DEIV++ L EQ++K+ +Q++ + RLA+R + L ++D Sbjct: 667 QLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQWI--QQYGSSDYARMKAMVTETLKEGFKPEFLNRIDEIVIYHALPLEQIKKIVDIQVECLKQRLADRRIVLELSD 802 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |