FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.322e-38 Identity = 77/137 (56.20%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTE VRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDF+NTVI+MTSN+G++ + + M QV + V+ EV+ FRPE +NR+DE+VVF L + ++ +AR+Q+K + RLA+ ++L ++D Sbjct: 666 LTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQQIQA--MATDDYQVIKLAVMAEVKTQFRPEFINRIDEVVVFHGLDEKHIQSIARIQLKSLENRLAKLELSLQISD 800
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.322e-38 Identity = 80/139 (57.55%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTVDF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL+ E+L + +Q+ V RL +R + L VTD+ Sbjct: 672 QLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPLTREELGGIVDIQVAGVSQRLTDRRITLDVTDS 807
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.590e-37 Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAV 409 LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+IIMTSNLGAE+L++ + + RD+V+ VR FRPE LNR+DE+++F L + + ++ +Q K + L +R + L++ Sbjct: 662 LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLVN-LGEDQDVDAVRDEVMGVVRASFRPEFLNRVDEVILFHRLRRKDMDRIVEIQFKRLESLLVDRKITLSL 795
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.077e-37 Identity = 72/138 (52.17%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+IIMTSNLG++++L + R +V+ +R++FRPE LNR+DE ++F L +LR + ++Q++ + RL E+ + L +TD Sbjct: 667 QLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTIIIMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRPEFLNRVDETIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTLKLTD 804
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.077e-37 Identity = 75/139 (53.96%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QL+EA+RR PY+VVLFDEVEKAH VFN LLQVLDDGR+TD QGRT+DF N VI+MTSN+G++ +L + ++ +VL +R+HFRPE LNR+D+ ++F PLS QL+++ +Q++ + LAE+ +AL VT A Sbjct: 673 QLSEAIRRHPYAVVLFDEVEKAHPDVFNLLLQVLDDGRITDSQGRTIDFCNAVIVMTSNIGSQFILEMGEEEASLDAVELKVLGALRQHFRPEFLNRIDDTILFQPLSRGQLQQIVDIQLQRLKRLLAEQAIALNVTPA 811
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.542e-37 Identity = 81/152 (53.29%), Postives = 103/152 (67.76%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKV--------TMQVARDQVLQE-----VRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVRRRPYSV+LFDEVEKAH VFN LQ+LDDGRLTDGQGR VDFRNT+IIMTSN+G+EH+LS + Q +Q L E + +FRPE LNR+DE+++F L+ + +R + +Q++ V RL R + L V DA Sbjct: 665 QLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDDGRLTDGQGRVVDFRNTIIIMTSNIGSEHILSARESRTHTSDLPVPETQSTEEQTLPEQIRGLLHTYFRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDA 816
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.626e-37 Identity = 78/137 (56.93%), Postives = 101/137 (73.72%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTE+VRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+IIMTSNLGAE+ L+ + RDQV++ VR FRPE LNR+DEI++F L ++ + +Q++ + L++R + L + D Sbjct: 664 LTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTSNLGAEY-LTALGENEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLSDRKITLELED 799
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_NITEU (Chaperone protein clpB OS=Nitrosomonas europaea GN=clpB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.042e-37 Identity = 77/137 (56.20%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTE VRR+PYSV+L DEVEKAH VFN LLQVLDDGR+TDGQGRTVDF+NTVI+MTSNLG++ ++ M G QV + V+ EV+ +FRPE +NR+DE+VVF L ++ +AR+Q+ ++ RLA+ + L V++ Sbjct: 667 LTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQ-MIQQMSGD-DYQVIKLAVMGEVKTYFRPEFINRIDEVVVFHALGEAHIKSIARIQLSNLGKRLAQMEMKLVVSE 801
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CORGL (Chaperone protein clpB OS=Corynebacterium glutamicum GN=clpB PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.042e-37 Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVRRRPY+VVLFDEVEKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++I+TSNLGA R+Q++ V+ F+PE +NRLD++V+FD LS EQL + +Q+K + RLA R + L V+D+ Sbjct: 664 QLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILILTSNLGAGG-------------TREQMMDAVKMAFKPEFVNRLDDVVIFDRLSPEQLTSIVDIQIKQLTDRLAGRRLNLRVSDS 789
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB2_ANASP (Chaperone protein clpB 2 OS=Anabaena sp. (strain PCC 7120) GN=clpB2 PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 7.892e-37 Identity = 69/138 (50.00%), Postives = 103/138 (74.64%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE +RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+NT+IIMTSN+G++++L R +V++ +R FRPE LNR+DE+++F L ++LR++ +LQ++ + RL +R ++L ++D Sbjct: 667 QLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQYILDIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDEVIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSD 804 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |