FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.031e-36 Identity = 78/138 (56.52%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL--LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTEA+RR+PYSVVL DEVEKAH VFN LLQVL+DGRLTD GRTVDFRNTV++MTSNLG+ + L+G + R V+ V HFRPE +NR+DE+VVF+PL+ EQ+ +A +Q+ + RLAER ++L ++ Sbjct: 662 LTEAIRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQELAG-----DREAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELS 794
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_LACPL (Chaperone protein clpB OS=Lactobacillus plantarum GN=clpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.346e-36 Identity = 76/139 (54.68%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT++IMTSNLG+E LL+G+ + + QV+Q V+ F+PE LNR+D+I++F PL + ++ + + RL +R + L ++D Sbjct: 663 QLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQQVMQLVQSRFKPEFLNRIDDIIMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISD 801
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 1.346e-36 Identity = 69/137 (50.36%), Postives = 106/137 (77.37%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 QLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD +GRTVDF+NT++I+TSN+G++++L + R +V + +R +FRPE LNR+DE ++F L +QL+++ R+Q+ + RL++R ++L+++ Sbjct: 667 QLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKNTILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMS 803
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.758e-36 Identity = 69/138 (50.00%), Postives = 102/138 (73.91%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF+N +IIMTSN+G+ +LL + +++V ++ F+PE LNRLD+I++F PL++ ++ K+ + ++D+ RL +R + L VT+ Sbjct: 667 QLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFKNCIIIMTSNIGSSYLLENKKEDGIDETVKNKVSNALKDRFKPEFLNRLDDIIMFKPLTNREITKIIDIFLQDIENRLKDRNITLIVTE 804
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.758e-36 Identity = 67/138 (48.55%), Postives = 103/138 (74.64%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRR+PYSV+LFDE+EKAH VFN LQ+ DDGRLTD +G T+DF+N++IIMTSN+G+EHLL+ + +D+V+ E++ F+PE LNRLD+I++F PLS ++ K+ + ++++ +L E+ + + + + Sbjct: 667 QLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKNSIIIMTSNIGSEHLLNNKGVSNVDEETKDKVMNELKGRFKPEFLNRLDDIIMFKPLSINEIGKIIDIFLENIKSKLKEKNIKIDIAE 804
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.296e-36 Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF NTV+I+TSN+G++ +L + +V + HFRPE LNRLDE ++F L E+LR++ LQ+ + RL +R + L ++D Sbjct: 667 QLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILDLGGDDSQYREMERRVHDALHAHFRPEFLNRLDETIIFHSLRREELRQIVALQVNRLRERLCDRKLGLEISD 804
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 2.296e-36 Identity = 76/137 (55.47%), Postives = 105/137 (76.64%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 LTEAVRR+PYSVVLFDEVEKAH VFNTLLQVLD+GRLTDGQGRTVDFR+TVIIMTSNLG++ + ++ + + + + V++ V HFRPE +NR+DE +VF L+ + ++A++Q++ + RL R + L+V + Sbjct: 667 LTEAVRRKPYSVVLFDEVEKAHSDVFNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSD--MIQLLAEKSYEEMKSAVMEIVMAHFRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLSVEE 801
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.115e-36 Identity = 75/145 (51.72%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+L+++ + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_STAAS (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MSSA476) GN=clpC PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.115e-36 Identity = 75/145 (51.72%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+L+++ + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_STAAR (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MRSA252) GN=clpC PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.115e-36 Identity = 75/145 (51.72%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNT+IIMTSN+GA+ L G + R +L+E++ FRPE LNR+D+I+VF L+ E+L+++ + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTD 745 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |