FC920862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_BLOFL (Chaperone protein clpB OS=Blochmannia floridanus GN=clpB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.681e-36 Identity = 77/130 (59.23%), Postives = 95/130 (73.08%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERG 394 LTE++RRRPYS+VL DE+EKAH+ VFN LLQVLDDGRLTD QGR VDF NTVIIMTSNLG++ L+ + VL V ++FRPE +NR+DEIVVF PLS + L +A +Q+K + RL ERG Sbjct: 664 LTESIRRRPYSIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMTSNLGSD-LIQKKFDISDYDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANIQLKYLYSRLEERG 792
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.725e-36 Identity = 74/148 (50.00%), Postives = 110/148 (74.32%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQ-----------VLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 QLTE+VRRRPY+VVLFDE+EK H VFN LLQ+L+DGRLTD +GRTVDF+NT++I+TSN+G++ + G G + ++ DQ V +E++++FRPE LNRLDEI+VF L+ +++ ++A + +K+V R++E+G+ L VT Sbjct: 602 QLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLILTSNVGSKVIEKG-GGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVT 748
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.140e-35 Identity = 74/145 (51.03%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNTVIIMTSN+GA+ L G + R +++E++ FRPE LNR+D+I+VF L+ ++L+++ + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTD 745
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.140e-35 Identity = 74/145 (51.03%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL-------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDG LTD +GRTVDFRNTVIIMTSN+GA+ L G + R +++E++ FRPE LNR+D+I+VF L+ ++L+++ + + + RL+E+ + + VTD Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTD 745
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 1.140e-35 Identity = 73/139 (52.52%), Postives = 103/139 (74.10%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+NT+IIMTSN+G++++ + +V++ + +FRPE LNR+DEI++F L QLR++ ++Q + RLA R ++L ++DA Sbjct: 668 QLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGSQYIFEYGGDDDRYEEILSRVMEAMLSNFRPEFLNRIDEIIIFHSLQKAQLREIVKIQTHRLESRLA-RKMSLKLSDA 805
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_AQUAE (Chaperone protein clpB OS=Aquifex aeolicus GN=clpB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.140e-35 Identity = 75/144 (52.08%), Postives = 106/144 (73.61%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMG------KVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 +LTEAVRR+PYSV+L DE+EKAH V + LQVLDDGRLTD GRTVDFRNTVIIMTSN+G+++LL+ + + A+++VL+E++ + RPE +NR+DEI+VF PL+ +L K+ L + +V RLAER + + +T+ Sbjct: 782 KLTEAVRRKPYSVILLDEIEKAHPRVLDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSNIGSQYLLNIPVDADEETLNREFEKAKEKVLEELKLYMRPEFINRIDEIIVFKPLTMRELSKIIDLLIANVNKRLAERNIKIELTE 925
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNPX (Chaperone protein clpB 2 OS=Synechococcus sp. (strain WH8102) GN=clpB2 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.140e-35 Identity = 80/143 (55.94%), Postives = 100/143 (69.93%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGA----EHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVRRRPY+V+L DEVEKAH VFN LLQVLDDGRLTD QG TVDFR+TV++MTSNL + EH SG +Q QV + FRPE LNR+DE++ F PL + L ++ RLQ+ D+ +AE+G++L V DA Sbjct: 697 QLTEAVRRRPYAVLLLDEVEKAHPDVFNLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVILEHARSGSSDDAQLQ---QQVDAALSSQFRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAEQGLSLEVDDA 836
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_STRMU (Chaperone protein clpB OS=Streptococcus mutans GN=clpB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.488e-35 Identity = 74/141 (52.48%), Postives = 106/141 (75.18%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTDA 418 QLTEAVR+R YS+VL DE+EKAH VFNTLLQVLD+GRLTD +GRT+DF+NT++IMTSN+G+ ++L + G +T +V R +VL E+ FRPE LNR+DE V+F+ LS + + V ++ + D+ RL E+ + L +T++ Sbjct: 659 QLTEAVRQRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKNTILIMTSNIGSTNILQSLQDSGCITSEV-RYKVLDELNHSFRPEFLNRIDETVLFNALSEKDMTGVVKVMVSDLQARLLEQDIHLTLTES 798
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 70/148 (47.30%), Postives = 111/148 (75.00%), Query Frame = 2 Query: 2 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL----------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVTD 415 QLTEAVR+RPY+VVLFDE+EKAH VFN LLQ+L+DGRLTD +GRT+DF+NT++IMTSN+G++ + L + ++ R+ V +E++++FRPE LNR+DEI+VF L+ +++R +A + ++++ R+ ++G++L VT+ Sbjct: 635 QLTEAVRKRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTLLIMTSNIGSKVIEKKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQVTE 782
BLAST of FC920862 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 2 Query: 5 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVXIRLAERGVALAVT 412 LTEAVRR+PYSV+L DEVEKAH VFN LLQVL+DGRLTD GRTVDFRNTVI+MTSNLG+ + ++G + R V+ V HFRPE +NR+DE+V+F+PL+ +Q+ + +Q+ + RLAER + + ++ Sbjct: 662 LTEAVRRKPYSVILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQ-IQELVG--DREAQRAAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLS 794 The following BLAST results are available for this feature:
BLAST of FC920862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920862 ID=FC920862; Name=FC920862; organism=Citrus clementina; type=EST; length=419bpback to top |