FC920866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB_COPC7 (Tubulin beta chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04743 PE=3 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.523e-90 Identity = 159/204 (77.94%), Postives = 175/204 (85.78%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKEAE CDCLQGFQ+ H ISKIREEYPDRMM T+SV PSPKVSDTVVEPYNATLSVHQLVEN+DE +DNEALYDICFRTLKL+TPT+GDLNHL+S MSG+T CLRFPGQLNSDLRKLAVN++PFPRLHFFM GFAPLT+RGS QYRA+TVPELTQQM+DAKNMM A++PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMTGFAPLTARGSAQYRAVTVPELTQQMFDAKNMMAASDPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB3_RAT (Tubulin beta-3 chain OS=Rattus norvegicus GN=Tubb3 PE=1 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.523e-90 Identity = 161/204 (78.92%), Postives = 175/204 (85.78%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKLATPT+GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A +PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB3_MOUSE (Tubulin beta-3 chain OS=Mus musculus GN=Tubb3 PE=1 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.523e-90 Identity = 161/204 (78.92%), Postives = 175/204 (85.78%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKLATPT+GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A +PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB3_MACFA (Tubulin beta-3 chain OS=Macaca fascicularis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.523e-90 Identity = 161/204 (78.92%), Postives = 175/204 (85.78%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKLATPT+GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A +PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB3_HUMAN (Tubulin beta-3 chain OS=Homo sapiens GN=TUBB3 PE=1 SV=2) HSP 1 Score: 332.028 bits (850), Expect = 1.523e-90 Identity = 161/204 (78.92%), Postives = 175/204 (85.78%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKLATPT+GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A +PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB3_BOVIN (Tubulin beta-3 chain OS=Bos taurus GN=TUBB3 PE=2 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.523e-90 Identity = 161/204 (78.92%), Postives = 175/204 (85.78%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKLATPT+GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A +PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB1_GADMO (Tubulin beta-1 chain OS=Gadus morhua PE=2 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 1.989e-90 Identity = 161/204 (78.92%), Postives = 175/204 (85.78%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYR+LTVPELTQQM+D KNMM A +PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDGKNMMAACDPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB4_CHICK (Tubulin beta-4 chain OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 2.598e-90 Identity = 161/204 (78.92%), Postives = 174/204 (85.29%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKE ENCDCLQGFQ+ H ISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVEN DE +DNEALYDICFRTLKLATPT+GDLNHL+SATMSGVT LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLT RGSQQYRALTVPELTQQM+DAKNMM A +PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTRRGSQQYRALTVPELTQQMFDAKNMMAACDPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB3_OOMCK (Tubulin beta-3 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB3 PE=3 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 3.393e-90 Identity = 162/204 (79.41%), Postives = 174/204 (85.29%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVR EAE+CDCLQGFQ+ H I+K+REEYPDR+M+TFSV PSPKVSDTVVEPYNATLSVHQ+VEN DE VLDNEALYDICFRTLKL TPT+GDLNHL+ MSGVT LRFPGQLN DLRK+AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ +DAKNMMCAA+PR Sbjct: 103 KGHYTEGAELIDSVLDVVRNEAESCDCLQGFQMTHSLGGGTGSGMGTLLIAKLREEYPDRVMMTFSVCPSPKVSDTVVEPYNATLSVHQIVENTDESFVLDNEALYDICFRTLKLTTPTYGDLNHLVCVCMSGVTSSLRFPGQLNCDLRKVAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQCFDAKNMMCAADPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB1_NOTCO (Tubulin beta-1 chain OS=Notothenia coriiceps neglecta GN=tubb1 PE=1 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 4.432e-90 Identity = 160/204 (78.43%), Postives = 174/204 (85.29%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAEL+D LDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRG QQYR+LTVPELTQQM+D+KNMM A +PR Sbjct: 103 KGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGGQQYRSLTVPELTQQMFDSKNMMAACDPR 306 The following BLAST results are available for this feature:
BLAST of FC920866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920866 ID=FC920866; Name=FC920866; organism=Citrus clementina; type=EST; length=634bpback to top |