FC920866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB2_LUPAL (Tubulin beta-2 chain OS=Lupinus albus GN=TUBB2 PE=3 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 2.420e-104 Identity = 185/204 (90.69%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAA+PR Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB2_ELEIN (Tubulin beta-2 chain OS=Eleusine indica GN=TUBB2 PE=2 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 2.420e-104 Identity = 185/204 (90.69%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAA+PR Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB1_ORYSJ (Tubulin beta-1 chain OS=Oryza sativa subsp. japonica GN=TUBB1 PE=2 SV=2) HSP 1 Score: 377.867 bits (969), Expect = 2.420e-104 Identity = 185/204 (90.69%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAA+PR Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB1_MAIZE (Tubulin beta-1 chain OS=Zea mays GN=TUBB1 PE=2 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 2.420e-104 Identity = 185/204 (90.69%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAA+PR Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSAMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB1_LUPAL (Tubulin beta-1 chain OS=Lupinus albus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 2.420e-104 Identity = 185/204 (90.69%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAA+PR Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB6_ARATH (Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 5.392e-104 Identity = 184/204 (90.20%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAA+PR Sbjct: 103 KGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB3_PEA (Tubulin beta-3 chain (Fragment) OS=Pisum sativum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 5.392e-104 Identity = 184/204 (90.20%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAA+PR Sbjct: 94 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 297
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB1_AVESA (Tubulin beta-1 chain (Fragment) OS=Avena sativa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 5.392e-104 Identity = 184/204 (90.20%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAA+PR Sbjct: 41 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPR 244
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB8_ORYSJ (Tubulin beta-8 chain OS=Oryza sativa subsp. japonica GN=TUBB8 PE=2 SV=1) HSP 1 Score: 375.941 bits (964), Expect = 9.198e-104 Identity = 184/204 (90.20%), Postives = 186/204 (91.18%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL P+FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAA+PR Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPR 306
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBB4_WHEAT (Tubulin beta-4 chain OS=Triticum aestivum GN=TUBB4 PE=2 SV=1) HSP 1 Score: 375.941 bits (964), Expect = 9.198e-104 Identity = 184/204 (90.20%), Postives = 187/204 (91.67%), Query Frame = 2 Query: 2 KGHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 KGHYTEGAELID LDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATP+FG+LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDAKNMMCAA+PR Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPSFGELNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRALTVPELTQQMWDAKNMMCAADPR 306 The following BLAST results are available for this feature:
BLAST of FC920866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920866 ID=FC920866; Name=FC920866; organism=Citrus clementina; type=EST; length=634bpback to top |