FC920866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.392e-32 Identity = 74/208 (35.58%), Postives = 116/208 (55.77%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRG-----SQQYRALTVPELTQQMWDAKNMMCAAEPRT 616 YT+G + + LD++ +EAE CD L+GF +CH + I + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L +AD +VLDN AL I L L P +N LI+ M+ T LR+PG +N+DL L +LIP PR HF M G+ PLT+ + R TV ++ +++ KN+M + ++ Sbjct: 108 YTQGEAVQETLLDMIDREAEYCDSLEGFNMCHSIAGGTGSGMGSYMLELISDRYSKKLIQTYSVFPNQSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERLHLHKPDVQQINSLIATVMAASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTAENAAGQVTSNIRKTTVLDVMRRLLQPKNIMVSTHTKS 315
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31 Identity = 70/204 (34.31%), Postives = 114/204 (55.88%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFP-SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL---TVPELTQQMWDAKNMMCAAEP 610 Y+ + + +D++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP S VSD VV+PYN+ L++ +L NAD +VLDN AL I L PTF N L+S MS T LR+PG +N+DL + +LIP PR HF + + P T++ ++ +A+ TV ++ +++ KN M + P Sbjct: 108 YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNP 311
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31 Identity = 69/196 (35.20%), Postives = 112/196 (57.14%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMM 595 YT+ ++ D L+++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ PTF +N ++S M+ T LR+PG +N+D+ L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M Sbjct: 108 YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFNSVRKTTVLDVMRRLLQTKNIM 301
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.088e-31 Identity = 70/204 (34.31%), Postives = 113/204 (55.39%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL---TVPELTQQMWDAKNMMCAAEP 610 Y ++ + +D++ +EAE D L+GF + H + ++ + +P +++ T+SVFP+ + VSD VV+PYN+ L++ +L NAD +VLDN AL I L + PTF N L+S MS T LR+PG +N+DL + +LIP PR HF + P TS+ + R + TV ++ +++ KN M + P Sbjct: 108 YAHAEKIFEDIVDMIDREAEGSDSLEGFSLLHSIAGGTGSGLGSYLLERLNDRFPKKIVQTYSVFPNNRSVSDVVVQPYNSLLTLKRLTLNADAVVVLDNAALAHIAADRLHIQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPTPRCHFLSTSYTPFTSQQVEDARTIRKTTVLDVMRRLLQPKNRMVSVNP 311
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.088e-31 Identity = 69/196 (35.20%), Postives = 112/196 (57.14%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMM 595 YT+ ++ D L+++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ PTF +N ++S M+ T LR+PG +N+D+ L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M Sbjct: 108 YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFTSVRKTTVLDVMRRLLQTKNIM 301
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.038e-30 Identity = 71/198 (35.86%), Postives = 113/198 (57.07%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY---RALTVPELTQQMWDAKNMM 595 YT+ ++ D L+++ +EA+ D L+GF + H + +I + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ PTF +N ++S M+ T LR+PG +N+D+ L +L+P PR HF M G+ PL+ Q+Y R T ++ +++ KN+M Sbjct: 108 YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERINDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSL--DQKYTSVRKTTFLDVMRRLLQTKNIM 301
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.038e-30 Identity = 70/197 (35.53%), Postives = 113/197 (57.36%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ--QYRALTVPELTQQMWDAKNMM 595 Y EGA+ + ++++ +EA+ D L+GF + H + K+ + YP +++ T+SVFP+ +D VV+PYN LS+ +LV NAD +VLDN A+ I LKL PT +N ++S M+ T LR+PG +N+DL L +L+P PR HF M G+ PL+ + R TV ++ +++ +N+M Sbjct: 108 YCEGAKYEEEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLEKLNDHYPKKLVQTYSVFPND--NDIVVQPYNCILSMKRLVLNADCVVVLDNTAITSIAVDRLKLLHPTISQVNSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLNDQKVSSIRKTTVLDVMRRLLQTRNIM 302
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.356e-30 Identity = 68/203 (33.50%), Postives = 114/203 (56.16%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS---RGSQQYRALTVPELTQQMWDAKNMMCAAEP 610 Y+ G + + ++++ +EAE D L+GF V H + ++ +++P +++ T+SVFP+ + D VV+PYN+ L++ +LV +AD +VLDN AL I L + TP+F N L+S ++ T LR+PG +N+DL + +LIP PR HF M + P TS ++ R TV ++ +++ KN M P Sbjct: 108 YSAGERIYEDIMEMIDREAEGSDSLEGFMVMHSIAGGTGSGLGSFLLERLNDKFPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPGYMNNDLVGIIASLIPTPRCHFLMTSYTPFTSDQIDKAKTIRRTTVLDVMRRLLQPKNRMVLTTP 310
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 68/197 (34.52%), Postives = 113/197 (57.36%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT--SRGSQQYRALTVPELTQQMWDAKNMM 595 Y + ++ + ++++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP+ +D VV+PYN LS+ +L+ NAD +VLDN AL I LKL PTF +N ++S M+ T LR+PG +N+DL L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M Sbjct: 108 YCDAEKVQEEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPNE--NDVVVQPYNCLLSMKRLILNADCVVVLDNTALTSIAVDRLKLLQPTFPQINSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLIDQKVTSVRKTTVLDVMRRLLQTKNIM 302
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 67/198 (33.84%), Postives = 108/198 (54.55%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL---TVPELTQQMWDAKNMM 595 Y G + + ++++ +EAE D L+GF + H + ++ + YP +++ T+SVFP D VV+PYN+ LS+ +L +AD +VLDN AL IC L + +F N L+S MS T LR+PG +N+DL + +LIP PR HF + P TS +Q +A+ TV ++ +++ KN + Sbjct: 108 YAAGERVYEEVMEMIDREAEGSDSLEGFMLLHSIAGGTGSGLGSYLLERMNDRYPKKLIQTYSVFPDADSGDVVVQPYNSLLSMKRLTNHADSVIVLDNAALSKICQDRLHVQVASFAQTNQLVSTVMSASTQTLRYPGYMNNDLVGMIASLIPTPRCHFLTTSYTPFTSDKIEQAKAVRKTTVLDVMRRLLQPKNRL 305 The following BLAST results are available for this feature:
BLAST of FC920866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920866 ID=FC920866; Name=FC920866; organism=Citrus clementina; type=EST; length=634bpback to top |