FC920866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 66/203 (32.51%), Postives = 115/203 (56.65%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAAEPRT 616 Y +G D D++ +EA+ + L+GF + H + ++ + +P +++ T+SVFP S VV+ YN+ L++ +L+ENAD +VLDN AL+ I L++ PT N L+S MS T LR+PG +N+DL + +LIP P+ HF + G+ PL+ R ++ R +V ++ +++ +N+M +A +T Sbjct: 108 YKQGESFYDDIFDMIDREADGSESLEGFLLTHSISGGTGSGMGSYILERLNDRFPKKIIQTYSVFPDD--SSVVVQQYNSVLTLKRLIENADSTVVLDNNALHRIVGENLRIDQPTMDQTNSLVSTVMSASTTTLRYPGYMNNDLVGMLASLIPTPKCHFLITGYTPLSIDRQTESVRKTSVLDVMRRLLQPQNIMVSAPTKT 308
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 4.363e-29 Identity = 66/203 (32.51%), Postives = 107/203 (52.71%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ---YRALTVPELTQQMWDAKNMMCAAEP 610 Y G + + D++ +EA+ D L+GF H + ++ + +P +++ T+SVFP + +D VV PYN+ L++ +L +NAD +VLDN AL I L + P+F N L+S MS T LR+PG +++DL + +LIP PR HF + + P T Q R TV ++ +++ KN M + P Sbjct: 108 YAAGEVVQEEVFDMIDREADGSDSLEGFMFLHSIAGGTGSGLGSFLLERMNDRFPKKLIQTYSVFPDTQAADVVVNPYNSLLAMRRLTQNADSVVVLDNAALSRIVADRLHVQEPSFQQTNRLVSTVMSASTTTLRYPGYMHNDLVGIIASLIPTPRSHFLLTSYTPFTGDNIDQAKTVRKTTVLDVMRRLLQPKNRMVSINP 310
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBA4B_HUMAN (Putative tubulin-like protein alpha-4B OS=Homo sapiens GN=TUBA4B PE=5 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.698e-29 Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 2 Query: 5 GHYTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI-------PFPRLH 487 GHYT G E ID LD +RK A+ C LQGF V H + + Y + L FS++P+P+VS +V+PYN+ L+ H +E++D ++DN+A+YDIC L + PT+ +LN LIS +S +T LRF G LN DL + NL+ P+P +H Sbjct: 45 GHYTIGKEFIDLLLDRIRKLADQCTGLQGFLVFHSLGRGTGSDVTSFLMEWLSVNYGKKSKLGFSIYPAPQVSTAMVQPYNSILTTHTTLEHSDCAFMVDNKAIYDICHCNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVSYLTSTSPWPPMH 212
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_NEUCR (Tubulin gamma chain OS=Neurospora crassa GN=tub-4 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.719e-29 Identity = 66/204 (32.35%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFP-SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ---YRALTVPELTQQMWDAKNMMCAAEP 610 Y G ++ + ++++ +EA+ D L+GF + H + ++ + +P +++ T+SVFP + D VV PYN+ L++ +L +NAD +VLDN AL I L + P+F N L+S MS T LR+PG +++DL + +LIP PR HF M + P T +Q R TV ++ +++ KN M + P Sbjct: 108 YQTGEQVHEEIMEMIEREADGSDSLEGFMMLHSIAGGTGSGLGSFLLERLNDRFPKKIIQTYSVFPDTTSAGDVVVHPYNSLLAMRRLTQNADSVVVLDNGALSHIAADRLHVQEPSFQQTNQLVSTVMSASTTTLRYPGYMHNDLVSILASLIPTPRCHFLMTSYTPFTGDQVEQAKTVRKTTVLDVMRRLLQPKNRMVSTVP 311
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_COCHE (Tubulin gamma chain (Fragment) OS=Cochliobolus heterostrophus GN=TUB4 PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 4.823e-28 Identity = 66/202 (32.67%), Postives = 110/202 (54.46%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG--FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAAEP 610 Y+ G ++ + D++ +EA+ D L+GF + H + ++ + +P +++ T+SVFP+ + D VV+PYN+ LS+ +L +NAD +VLDN AL I L + TP+F N L+S MS T LR+P ++DL + +LIP PR HF M F+ ++ R TV ++ +++ KN M + P Sbjct: 43 YSMGEQVHEDIWDMIDREADGSDSLEGFMMLHSIAGGTGSGLGSYMLERLNDRFPKKLIQTYSVFPNTQDGDIVVQPYNSLLSMRRLTQNADSVVVLDNGALTRIAADRLHVMTPSFEQTNQLVSTVMSASTTTLRYPAYSHNDLVGIVASLIPTPRCHFLMTSYTFSGENVEQAKTVRKTTVLDVMRRLLQPKNRMVSTNP 244
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_RETFI (Tubulin gamma chain OS=Reticulomyxa filosa PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.228e-28 Identity = 66/197 (33.50%), Postives = 113/197 (57.36%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKV-SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ-QYRALTVPELTQQMWDAKNMM 595 YT E + +D++ +E +N D L+GF + H + ++ + YP +++ T+SVFP+ S VV PYN+ L++ +L+ NAD +V+DN +L+ I L+L +F + N +IS M+ T LR+PG +N+DL L +L+P PR HF M F PL +G+Q + + +V ++ +++ KN+M Sbjct: 108 YTHATEKYEHIMDMIDRE-DNSDSLEGFVLTHSIAGGTGSGFGSHMLEQLTDRYPKKIIQTYSVFPNDSERSSVVVHPYNSVLALKRLILNADAVVVIDNTSLHRIADERLQLDFASFKETNSIISTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRAHFLMTSFTPLVIKGAQRRIQKTSVLDVMRRLLQPKNIM 303
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.188e-26 Identity = 66/204 (32.35%), Postives = 114/204 (55.88%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFP--SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAAEPR 613 Y++G ++ + +D++ +E +N D L+GF + H + + + Y +M+ TFSVFP + + SD VV+PYN+ L++ +L+ + D +V+DN +L I LKL PTF N +IS MS T LR+PG +N+D+ L +LI P+ HF + + P+T + + TV ++ +++ KN+M +A R Sbjct: 108 YSQGHKVEEEIIDMIDREVDNSDNLEGFILSHSIAGGTGSGMGSYLLELLNDNYSKKMIQTFSVFPLLTNESSDVVVQPYNSILTLKRLILSTDSVVVIDNTSLNRIFVERLKLNNPTFQQTNTIISNVMSASTTTLRYPGSMNNDMISLISSLIINPKCHFLITSYTPITIDKHISNVQKTTVLDVMKRLLHTKNIMVSAPVR 311
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.992e-25 Identity = 63/204 (30.88%), Postives = 113/204 (55.39%), Query Frame = 2 Query: 5 GH-YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP-LTSRGSQQYRALTVPELTQQMWDAKNMMCAAE 607 GH Y G + + +D++++EAE CD L+ F + H + +I+EE+P +++ T+S+FP+ + SD VV+PYN+ L++H+L+EN+D +V+DN +L +L++ TPTF +N LIS M+ T +RFPG + + + L+P L F + + P + S+ R T ++ +++ K + E Sbjct: 98 GHGYCVGKAMGNDVIDMIQREAEGCDALETFLLLHSIAGGTGSGFGSLLLERIKEEFPKKIVQTYSIFPNNDESSDVVVQPYNSVLTLHRLIENSDCIVVMDNSSLGRYTLDSLRIGTPTFDHINLLISTVMAASTSTIRFPGYMYCTHQSINNCLVPLDPLKFVVPSYTPFVCDEMSRVVRKATCSDVMRRLLLPKTRLAGYE 301
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.112e-24 Identity = 62/207 (29.95%), Postives = 110/207 (53.14%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS---RGSQQYRALTVPELTQQMWDAKNMMCAAEPRTVV 622 Y G E D ++++ KE + +GFQ+ H + + + Y +++ T+SVFPS + S+ VV+PYN L++ +L++N+D ++ DN+AL ++ R L+ + ++ N LI++ MS VT LRFP + + L + L+P P LHF F P TS G++ ++ L+ ++ ++D N M + T V Sbjct: 110 YDYGLEKQDEFMNMIDKEIDATGNFEGFQLIHSVAGGTGSGLGSNLLEALSDRYHKKIVSTYSVFPS-RESEVVVQPYNTILTLRRLIDNSDASVLFDNDALLNLTARVLRDSNTSYQQTNQLIASVMSSVTNSLRFPSYMYNSLPSIFSTLVPTPELHFLAPSFTPFTSDFVPGAKDFKRLSAYDVILDLFDKNNSMVTRDTDTPV 315
BLAST of FC920866 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.208e-24 Identity = 61/198 (30.81%), Postives = 100/198 (50.51%), Query Frame = 2 Query: 11 YTEGAELIDFPLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR---GSQQYRALTVPELTQQMWDAKNMM 595 Y G + D +D++ +E ++ D +GFQ+ H + + + Y + T+SVFPS K S+ VV PYN L++ +L E+AD ++ DN AL ++ RT + ++ N LIS+ +S +T LRFP + + + + LIP P LHF F P T G Q+Y+ T ++ + D N + Sbjct: 110 YDRGVQNQDRIMDIIDRELDSTDNFEGFQLLHSVAGGTGSGLGSSLLEALTDRYSKSFITTYSVFPS-KQSEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFRDPNTSYEHTNQLISSALSSITNSLRFPSYMYNSMASIFSTLIPTPELHFLTPNFTPFTPDYIIGGQRYKKNTAYDVLLDLLDPFNSL 306 The following BLAST results are available for this feature:
BLAST of FC920866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920866 ID=FC920866; Name=FC920866; organism=Citrus clementina; type=EST; length=634bpback to top |