FC920868

Overview
NameFC920868
Unique NameFC920868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:38..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.467e-29
Identity = 76/198 (38.38%), Postives = 98/198 (49.49%), Query Frame = 3
Query:  117 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYQKLTLH*TLTRSAYA 707
            L  NFY   CP A   IK  V     +      S LR  FHDC VQ CDAS+LLD T     EK     +  +R F  I+ IK  VE  CPGVVSCADIL ++ RD VVALGG    +  GRRD   +        LP    ++S ++  F+  G     LV L G+H++G+  C     R+Y +  +  T  +S  A
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESNIDPTYAKSLQA 221          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.236e-28
Identity = 66/181 (36.46%), Postives = 102/181 (56.35%), Query Frame = 3
Query:  126 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY 662
            +FY  TCPQ  DI+   +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K A+E+ CP  VSCAD+L ++ ++ +V  GGP   +  GRRD  +   ++    LP  + ++  + +RF  +G+D +  LVAL G H+ G++ C  ++ RLY
Sbjct:   27 SFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLY 207          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.615e-28
Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = 3
Query:  114 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 662
            G  + FY  TCP+AE I++  V+  ++     A   LR  FHDC V  CD S+L++ +    +E+    +  ++ F  IE+ K  +E  CPGVVSCADIL L+ RD VVA  G    + TGRRDGR SRA      LP   DS+ +   +F   G++   LVAL G+H++G   C  +  RL+
Sbjct:   31 GTRVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGSD---AERTAIPNRNLKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAGD-LPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLF 209          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.615e-28
Identity = 66/179 (36.87%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  129 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 662
            FY  TCP A  I++  ++  ++       S +R  FHDC V  CDAS+LLD +    SEK     +   R F  ++NIK A+E  CPGVVSC+DIL L+    V   GGP   +  GRRD   +        +P   + +S +  +F+A+G++   LVAL G+H+ GR  C    +RL+
Sbjct:    6 FYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLF 184          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.615e-28
Identity = 67/179 (37.43%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  129 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 662
            FY  TCP A  I++  ++   +       S +R  FHDC V  CDAS+LLD T    SEK    +    R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  GRRD   +        +P   +S+S +  +F+A+G++   LVAL G+H+ GR  C    +RL+
Sbjct:   36 FYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLF 214          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28
Identity = 68/181 (37.57%), Postives = 102/181 (56.35%), Query Frame = 3
Query:  126 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL--DSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 662
            ++Y+ TCP    I++E V     +   TA   LR  FHDC ++ CDAS+L+  +S  K   + +++ S     F  +  IK A+E  CPGVVSCADIL  + RD V  +GGPY  +K GR+DG +S+A  +   +P  N ++  +   F   G     +VAL G+H++G +HC +   RLY
Sbjct:   36 DYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLY 216          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.597e-28
Identity = 69/185 (37.30%), Postives = 97/185 (52.43%), Query Frame = 3
Query:  117 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYQK 668
            L   FY+ +CPQA++I+   ++    +    A S LR  FHDC VQ CDAS+LLD +    SEK        +R F+ I+ IK  +E+ CP  VSCADIL L+ R   +  GGP   L  GRRD R +        +P  N ++  +L  F   G++   LV+L G H++G   C     RLY +
Sbjct:   45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQ 229          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.698e-28
Identity = 63/183 (34.43%), Postives = 106/183 (57.92%), Query Frame = 3
Query:  117 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 659
            L ++FY  +CP+  DII+E +         TA + LR  FHDC    CDAS+L+ ST    +E++   +  +    F  +   K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H++G +HC +  +R+
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRV 214          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.698e-28
Identity = 65/179 (36.31%), Postives = 94/179 (52.51%), Query Frame = 3
Query:  129 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 662
            FY  TCP A  I++  ++   +       S +R  FHDC V  CD SLLLD T    SEK    +    R F  +++IK A+E  CPG+VSC+DIL L+    V   GGP   +  GRRDG  +        LP   + ++ +  +F A+G+    +V+L G+H+ GR  CV   +RL+
Sbjct:   37 FYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLF 215          
BLAST of FC920868 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.136e-28
Identity = 68/183 (37.16%), Postives = 102/183 (55.74%), Query Frame = 3
Query:  117 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 662
            L + FY+ +C  AE I+K++V+  + R    A   +R  FHDC V+ CD S+L+DST    +EK+   +   +R F  I++ K  +E  C GVVSCADI+  + RD V   GG    +  GRRDGR S A      LP    ++  + + F+  G+    +V L G+H++GR+HC    +RLY
Sbjct:   61 LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLY 243          
The following BLAST results are available for this feature:
BLAST of FC920868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1_ARAHY9.467e-2938.38Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER38_ARATH1.236e-2836.46Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PERN1_TOBAC1.615e-2839.34Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PERA2_ARMRU1.615e-2836.87Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER53_ARATH1.615e-2837.43Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER65_ARATH2.109e-2837.57Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER9_ARATH3.597e-2837.30Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER63_ARATH4.698e-2834.43Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER54_ARATH4.698e-2836.31Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER5_VITVI6.136e-2837.16Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]

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Properties
Property NameValue
Genbank descriptionC32014A10EF RVDevelop1 Citrus clementina cDNA clone C32014A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920868 ID=FC920868; Name=FC920868; organism=Citrus clementina; type=EST; length=727bp
AGAGAAGAGTAGAAGAGACAATGGGTACGAAAGCTGTCTTCTTGCTTTCA
GCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAA
TGAAGAGGACCCAGGTCTTGTTATGAATTTTTACAAGGATACATGCCCTC
AGGCCGAGGACATTATCAAGGAACAAGTTAAGCTTCTGTACAAGCGCCAC
AAGAACACTGCATTTTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGT
CCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGT
CTGAGAAGGAAATGGACAGGAGCTTTGGTATGAGGAACTTCAGGTACATT
GAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTG
TGCTGATATTCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAG
GCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGA
GCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGT
TGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTG
CTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTG
CACCGTCTGTACCAGAAGTTGACCCTGCACTGAACCCTGACACGTTCCGC
ATATGCTCCATAAGTGTCCTGATGCAA
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