FC920869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 7.200e-27 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 166 LGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 + +IS+ +FE +L +RND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF AQT ETTGGW AP G Y+WGYCY R+ P DYC Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSP-GDYC 100
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 7.200e-27 Identity = 60/123 (48.78%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 94 SAQNCGSGVVCGERDTGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPAS-DYC 456 SA CG G G+ G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + KRE+AAF AQT ETTGGW AP G YAWGYC+ + A DYC Sbjct: 61 SAAGCGGG----GPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYC 179
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.316e-25 Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 148 GTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDY 453 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG A G +A GYC++R+ N+ S + Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSGF 113
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 8.801e-25 Identity = 51/97 (52.58%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 148 GTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNR 438 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC++RQ+++ Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQ 113
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.149e-24 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 142 GHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 G+ + I+S +++ L +++D CPARGFYTY +F+ AA FP F +G RKRE+AAF AQ ETTGGW AP G YAWG CY ++N P S YC Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEIN-PQSSYC 144
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.961e-24 Identity = 50/97 (51.55%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 148 GTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNR 438 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC+++Q+ + Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQ 113
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.345e-24 Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 148 GTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDY 453 GT +G I++ ++F+ +L RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG +P G YA GYC++R+ N+ + Y Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNGY 120
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.368e-24 Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 166 LGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQV 432 +G II+R +FE +L +R D C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT ETTGGW AP G +AWGYC + ++ Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEI 114
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.698e-23 Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 166 LGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQ 429 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT ETTGG A + GYC++RQ Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ 112
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.076e-22 Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 166 LGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQ 429 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT ETTGG A + GYC++RQ Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ 112 The following BLAST results are available for this feature:
BLAST of FC920869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920869 ID=FC920869; Name=FC920869; organism=Citrus clementina; type=EST; length=457bpback to top |