FC920869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.397e-22 Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 106 CGSGVVCGERDTGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPAS 447 C + + +G G +G +I++ VF +LP R++ +CPARGFYTYDAFI AA +FPAFG SG + +RE+AAFF QT ETTGG ++ WGYC+ ++N+ S Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATS 125
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.130e-22 Identity = 57/155 (36.77%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 49 SLLIFSLALSFVLGGSAQNCGSGVVCGERDTGHG---TDGGELGKIIS----------------REVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 +L + SL LS +LG S+ G G + + GG G ++ +FE +LP RN+ CP +GFYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC + ++N P SDYC Sbjct: 5 ALTVLSLLLSLLLGVSSDTAQCGSQAGNATCPNDLCCSSGGYCGLTVAYCCAGCVSQCRNCFFTESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELN-PNSDYC 158
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.190e-21 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 157 GGELG--KIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 GG G +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT T+ GG Y+WGYCY ++V SD+C Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFC 185
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.190e-21 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 157 GGELG--KIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 GG G +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT T+ GG Y+WGYCY ++V SD+C Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFC 185
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.608e-18 Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 166 LGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWG 411 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT ETTGGWP AP G Y G Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG 74
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 3.706e-15 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 139 TGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C+I +D+C Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFC 223
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.352e-14 Identity = 44/123 (35.77%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 88 GGSAQNCGSGVVCGERDTGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 G + CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P+FG +G+ KREIAAFFA ET +CYI +++ P+ +YC Sbjct: 43 GTGSDYCGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYC 150 The following BLAST results are available for this feature:
BLAST of FC920869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920869 ID=FC920869; Name=FC920869; organism=Citrus clementina; type=EST; length=457bpback to top |