FC920872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 49/159 (30.82%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 79 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVH----------PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW--HRDLCRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYN 513 K + +GD G GKT+ + ++ G+F K+ T+G++ P +I WDTAGQE+F L ++ +++FD+T ++ NV W + CEN IVLCGNK D+++ R VK ++ K + Y+E SA + N Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTN 169
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RASEF_HUMAN (RAS and EF-hand domain-containing protein OS=Homo sapiens GN=RASEF PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 49/169 (28.99%), Postives = 83/169 (49.11%), Query Frame = 1 Query: 73 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR--VCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQ------YYEISAKSNYNFEKPFLYLARKL 549 ++K+V+ GD GK++F+ R EF + T+GV+ + + WDTAGQE+F + Y+ ++++DVT ++ N+ W D+ E +PI+L GNK D+++ Q V H + L + E SAK N + L+LAR++ Sbjct: 541 AYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREW-VDMIEDAAHETVPIMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREV 708
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAK---QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 549 +KLV++G GG GK+ + + G F +KY+PTI + + + + DTAG E+F +RD Y +GQ +++ +TA+ T+ ++ + RV +++PI+L GNK D+++ +V K Q + + + E SAKS N + F L R++ Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPIILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RALA_SAGOE (Ras-related protein Ral-A OS=Saguinus oedipus GN=RALA PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 49/161 (30.43%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 79 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 549 K+++VG GG GK+ + + EF + YEPT + + + +++ DTAGQE + +RD Y+ G+ + +F +T ++ + + RV EN+P +L GNK D+++ RQV ++ + N+ Y E SAK+ N +K F L R++ Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREI 175
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RALA_RAT (Ras-related protein Ral-A OS=Rattus norvegicus GN=Rala PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 49/161 (30.43%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 79 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 549 K+++VG GG GK+ + + EF + YEPT + + + +++ DTAGQE + +RD Y+ G+ + +F +T ++ + + RV EN+P +L GNK D+++ RQV ++ + N+ Y E SAK+ N +K F L R++ Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREI 175
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RALA_MOUSE (Ras-related protein Ral-A OS=Mus musculus GN=Rala PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 49/161 (30.43%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 79 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 549 K+++VG GG GK+ + + EF + YEPT + + + +++ DTAGQE + +RD Y+ G+ + +F +T ++ + + RV EN+P +L GNK D+++ RQV ++ + N+ Y E SAK+ N +K F L R++ Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREI 175
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 44/163 (26.99%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 49 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 528 + Q DY FKL+++G+ GKT+F+ R+ F + T+G++ + + +I+ WDTAGQE++ + YY ++M+D+ + ++ V W + +N ++L GNK D+++ +V + +L +++E SAK N N ++ F Sbjct: 15 ADQNFDY-MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVF 176
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 44/163 (26.99%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 49 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 528 + Q DY FKL+++G+ GKT+F+ R+ F + T+G++ + + +I+ WDTAGQE++ + YY ++M+D+ + ++ V W + +N ++L GNK D+++ +V + +L +++E SAK N N ++ F Sbjct: 15 ADQNFDY-MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVF 176
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: YPT10_YEAST (GTP-binding protein YPT10 OS=Saccharomyces cerevisiae GN=YPT10 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 49/156 (31.41%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 73 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIG-------VEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFE 519 + K+V++GD GKT+ V R +G+F K+ TIG +EV D T +I WDTAGQE++ L YY A+I+F++ + + TW +DL + +++ GNK D+ + + + L Y +SAK+ YNF+ Sbjct: 4 TIKVVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTE-KRIHMEIWDTAGQERYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQDLQDRAQGTQVIIVGNKYDLVCEEHSGEVTIPAELQGLPYVAVSAKTGYNFD 158
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 55 QTVDYPSF-KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPF 528 +T++Y K+V++GD G GK+ + R+ EF TIGVE + I+ WDTAGQEK+ + + YY A+I++++ R ++ N+ W + ++ I+L GNK D+K R+V + F K +Q+ E SA + N E F Sbjct: 4 KTIEYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAF 165 The following BLAST results are available for this feature:
BLAST of FC920872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920872 ID=FC920872; Name=FC920872; organism=Citrus clementina; type=EST; length=693bpback to top |