FC920872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RASD_DICDI (Ras-like protein rasD OS=Dictyostelium discoideum GN=rasD PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 55/172 (31.98%), Postives = 89/172 (51.74%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLAR----KLAGDPNS 567 +KLVIVG GG GK+ + + F +Y+PTI + + + DTAGQE++ +RD Y GQ + ++ +T+R +Y + ++ + RV + +P++L GNK D+ + RQV + + N + E SAKS N E+ F L R +L GD +S Sbjct: 4 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIE-DSYRKQVSIDDETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSYDEIASFREQILRVKDKDRVPLILVGNKADLDHERQVSVNEGQELAKGFNCPFMESSAKSRINVEEAFYSLVREIRKELKGDQSS 174
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 54/172 (31.40%), Postives = 84/172 (48.84%), Query Frame = 1 Query: 79 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTI----------GVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQV---TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 549 KLVIVGDGG GK+ + +F +Y+PTI EV+ LD DTAGQE++ +RD Y G+ +I++ + +R +++ V T+ + RV PIV+ GNK D+ ++ K + + + E SAKS N E+ F L R++ Sbjct: 6 KLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSYRKQVNIDEEVYMLDIL-----------DTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLSTYPIVIIGNKADLPDKDRKVPPMEGKELAKSFGAPFLETSAKSRVNVEEAFFTLVREI 166
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RACC_DICDI (Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 49/166 (29.52%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 79 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPT-WHRDLCRVCENIPIVLCGNKVDVKN--------RQVKAKQVT-------FHRKKNLQYYEISAKSNYNFEKPF 528 KLV++GDG GKT + + F + Y PT+ + + ++ I WDTAGQE++ LR Y + +I F +T ++++NV T W+ ++ C +P +L G K+D ++ +Q K +T R K ++Y E SAK++ N ++ F Sbjct: 8 KLVVIGDGAVGKTCLLISYANNRFPEDYIPTV-FDNYVVNLTAGDRNIELGLWDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPEVMHFCPEVPQILVGTKLDTRDDRGVLDKLQQTGHKPITTEQGNDLARRIKAIKYMECSAKTSQNLKQVF 172
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RECG_ENTHI (Rho-related protein racG OS=Entamoeba histolytica GN=RACG PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 79 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQV 453 KLVIVGDG GKT + + T F +Y PT+ E + + KI WDTAGQE + LR Y ++ F V A +Y+NV W ++ + C N+PI+L G K+D+++ + K++ Sbjct: 5 KLVIVGDGAVGKTCMLISYTTNAFPNEYIPTV-FENYNSSLVVDDVKINLGLWDTAGQEDYDRLRPLSYPSTDVFLVCFSVIAPASYENVEGKWKPEIDQHCPNVPIILVGTKIDIRDDPEQVKRL 129
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RB33B_PONAB (Ras-related protein Rab-33B OS=Pongo abelii GN=RAB33B PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 52/167 (31.14%), Postives = 87/167 (52.10%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR---VCENIPIVLCGNKVDVKNR-QVKAKQV-TFHRKKNLQYYEISAKS---NYNFEKPFLYLARKL 549 FK++++GD GKT R G F + E TIGV+ + +I+ WDTAGQE+F + YY + + ++D+T ++ ++P+W + C+ + +IP +L GNK D+++ QV F ++ +E SAK+ N + E F+ LA KL Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEE-CKQHLLASDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 199
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RB33B_HUMAN (Ras-related protein Rab-33B OS=Homo sapiens GN=RAB33B PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 52/167 (31.14%), Postives = 87/167 (52.10%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR---VCENIPIVLCGNKVDVKNR-QVKAKQV-TFHRKKNLQYYEISAKS---NYNFEKPFLYLARKL 549 FK++++GD GKT R G F + E TIGV+ + +I+ WDTAGQE+F + YY + + ++D+T ++ ++P+W + C+ + +IP +L GNK D+++ QV F ++ +E SAK+ N + E F+ LA KL Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEE-CKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 199
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAS_SCHPO (Ras-like protein 1 OS=Schizosaccharomyces pombe GN=ras1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 549 +KLV+VGDGG GK+ + + F +Y+PTI G + DTAGQE++ +R+ Y G+ ++++++T+R ++ + T+++ + RV + P+VL NK D++ +V +A+ + + Y E SAK N E+ F L R + Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB12_RAT (Ras-related protein Rab-12 (Fragment) OS=Rattus norvegicus GN=Rab12 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 46/153 (30.07%), Postives = 84/153 (54.90%), Query Frame = 1 Query: 91 VGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-NRQVKAKQVTFHRKK--NLQYYEISAKSNYNFEKPFLYL 537 +G G GKT+ ++R F + + T+GV+ KIR WDTAGQE+F + YY + I+++D+T + T+ ++P W + + + E+ ++L GNK+D + +R++ +Q ++ ++ E SAK N+N ++ FL L Sbjct: 1 IGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLAGNKLDCETDREISRQQGEKFAQQITGMRLSEPSAKDNFNVDEIFLKL 153
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RB33B_MOUSE (Ras-related protein Rab-33B OS=Mus musculus GN=Rab33b PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 52/167 (31.14%), Postives = 86/167 (51.50%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR---VCENIPIVLCGNKVDVKNR-QVKAKQV-TFHRKKNLQYYEISAKS---NYNFEKPFLYLARKL 549 FK++++GD GKT R G F + E TIGV+ + +I+ WDTAGQE+F + YY + + ++D+T ++ ++P W + C+ + +IP +L GNK D+++ QV F ++ +E SAK+ N + E F+ LA KL Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEE-CKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 199
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RASS_DICDI (Ras-like protein rasS OS=Dictyostelium discoideum GN=rasS PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 73 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVK-AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR--KLAGDPNSH 570 +FKLV+VG GG GK+ + + +F +Y+PT+ + + + + +DTAGQE F +RD Y G+ + ++ +T ++K + H L +V +++P VL GNK D+ R+V A+ +K N ++ E SAK N + F L R K A N H Sbjct: 3 NFKLVLVGPGGVGKSCLTIQFIAQKFVDEYDPTLE-DSYRKQTTVDGEECLLDIYDTAGQEDFSAVRDQYMRTGEGFLCVYSITYLQSFKEIHRLHNHLLKVKDLDSVPFVLVGNKCDLNEYREVSTAEGEELAKKLNCKFLETSAKERINVSESFYELVREVKKARQSNQH 173 The following BLAST results are available for this feature:
BLAST of FC920872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920872 ID=FC920872; Name=FC920872; organism=Citrus clementina; type=EST; length=693bpback to top |