FC920872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL-----AGDPNSHFVE 579 FKL+++GD G GKT + R F + TIG+++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+++++V KAK R+ ++++E SAK+N N EK FL LA + +PNS V+ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVD 185
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB9A_HUMAN (Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21 Identity = 54/178 (30.34%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAG--DPNSHFVES 582 FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK+D+ RQV ++ + N Y+E SAK N F R++ D + H +++ Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQT 185
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB23_MOUSE (Ras-related protein Rab-23 OS=Mus musculus GN=Rab23 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 73 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNSHFVESP 585 + K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQE+F + YY Q +++F T R +++ + +W + +IP L NK+D +KN + + ++ L++Y S K + N + F YLA K E P Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDDSCIKNEEAEG----LAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQKLKQQITEDP 181
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 59/160 (36.88%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 79 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 549 K+V++G GKT R++ G F K+ TIG KI++ WD+AGQ++F L YY AI++FD+T + T+ V W +L + E I +VLCGNK+D+ +NRQVK++ + + N Y E SAK N E FL + +KL Sbjct: 11 KVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB26_DROME (Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 59/180 (32.78%), Postives = 95/180 (52.78%), Query Frame = 1 Query: 46 PSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEK-KYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDV--KNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNSH 570 P TV++ K +++GD G GKT+F+ ++ TGEF + T+G+ + + +++ WDTAGQE+F + YY ++++DVT + TY N+ W ++ E++ IVL GNK D RQVK + R+ N+ + E SAK+ N E F +AR+L H Sbjct: 184 PFDDTVNH---KTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYEH 360
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB5B_PONAB (Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 549 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB5B_MOUSE (Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 549 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 549 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ + N L + E SAK+ N FL +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 56/185 (30.27%), Postives = 99/185 (53.51%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNSHFVESPALAPPEVQIDLA 621 FKL+++GD G GKT + R F + TIG++ + KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+++++V K+K R+ ++++E SAK+N N EK FL LA + ++P P +D++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDI-------LQKTPVKEPDRENVDIS 187
BLAST of FC920872 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 1 Query: 76 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNSHFVESPALAPPEVQIDLAAQ 627 FK+V++GD G GK+ + R EF + + TIGVE ++ WDTAGQE++ + YY A++++D+T R T+ NV W R+L NI I++ GNK D+K+ + +++ K+ L + E SA N EK F + ++ H + ALA E +L Q Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEI-----YHIISKKALAAQEASSNLPGQ 194 The following BLAST results are available for this feature:
BLAST of FC920872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920872 ID=FC920872; Name=FC920872; organism=Citrus clementina; type=EST; length=693bpback to top |