FC920879

Overview
NameFC920879
Unique NameFC920879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length601
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14
Identity = 52/138 (37.68%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  193 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600
            RA +AEFI+T LF++  V + +   K  S+    T G+  IA   G  +FV V   A ISGGH+NPAVT GL +  ++++   +FY + Q LG+     ++K   G      LA   H VA G    +G+  EII TF
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGG-----LAVPTHSVAAGLGSIEGVVMEIIITF 151          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-14
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600
            E+ S +F +A  AEF+AT +F++  + + +         +   +  I+ AFG  I  +      +SGGH+NPA+TL L +  ++SL RA+FY+V Q +GAI GA ++ G         LA   + + +  T G  + AE+I TF
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLA--VNALNNNTTAGQAVVAEMILTF 140          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.579e-14
Identity = 54/147 (36.73%), Postives = 79/147 (53.74%), Query Frame = 1
Query:  166 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600
            G+  S +  +A +AEFIAT LF++  V + +   K  S+      G+  +A A    +FV V   A +SGGH+NPAVTLGL +   +++   LFY + QCLG+     ++K F+  G    L+   H VA G     G+  EII TF
Sbjct:   10 GDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK-FVTNG----LSVPTHGVAAGMDAIQGVVMEIIITF 151          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 6.104e-14
Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600
            + +R  +AEF+ TF  + I + +  G    +   +      IA+ FG ++  L      +SG HINPAVT+GL +   +S+ +  FY+V QC+GAI GA V+K    +   G L  G   +A G + G G+  E + TF
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVGGL--GVTGIAPGLSTGQGVLIEALITF 152          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.972e-14
Identity = 54/147 (36.73%), Postives = 80/147 (54.42%), Query Frame = 1
Query:  166 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600
            G+  S S  +A ++EFIAT LF++  V + +   K  S+      G+  IA A    +FV V   A ISGGH+NPAVTLGL +   ++L    FY + QCLG+I  A ++  F+  G+    +   H V+ G    +G+  EI+ TF
Sbjct:   10 GDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIV-ACLLLVFVTNGK----SVPTHGVSAGLGAVEGVVMEIVVTF 151          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.041e-13
Identity = 48/143 (33.57%), Postives = 71/143 (49.65%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGT 597
            E +S+SF+RA  AEF  T  +++  +   +             +  IA AFG ++  +V     +SG HINPAVT    +  ++SL RA+FY+  Q LGA+ GA V+ G   A   G LA   + +  G + G     EI  T
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASL-----KWAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLA--LNTLHPGVSLGQATTVEIFLT 138          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.360e-13
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 1
Query:  166 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600
            G+  S +  +A ++EFIAT LF++  V + +   K  S+      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + QCLG+I  A ++  F+  G+    +   H VA G    +G+  EI+ TF
Sbjct:   10 GDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIV-ACLLLVFVTNGE----SVPTHGVAAGLGAIEGVVMEIVVTF 151          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.320e-13
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 1
Query:  184 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600
            + +R  +AEF+ TF  + I + + MG         T     IA+ FG ++  L      +SG HINPAVT+GL +   +S+ +  FY+V QC+GAI GA ++K    +   G L  G   +    T G G+  E + TF
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGL--GVTGIDPRLTAGQGVMIEALITF 153          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 53/147 (36.05%), Postives = 73/147 (49.66%), Query Frame = 1
Query:  166 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600
            GE     F+R  + E + TFLF++I V   M    + TK ST G    A A G  + V V  TAG  ISGGH+NPAVTL L +   ++L R+  Y+  Q L +     +++   G      LA   H +A G     G+ AE + TF
Sbjct:   10 GEASEPDFFRGVLGELVLTFLFVFIGVGAAM-TDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGG-----LATPVHALAEGVGPLQGVVAEAVFTF 150          
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 1
Query:  169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGT 597
            EL+S +F RA  AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT+   +   +S+ RA FY+  Q LGA+ GA ++     A   G LA   + +++  T G  +  E+  T
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLA--VNALSNSTTAGQAVTVELFLT 138          
The following BLAST results are available for this feature:
BLAST of FC920879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
TIP21_ARATH1.230e-1437.68Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP5_SHEEP2.098e-1433.33Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP_ANTMA3.579e-1436.73Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
AQP_ANOGA6.104e-1433.81Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP23_ARATH7.972e-1436.73Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
MIP_RANPI1.041e-1333.57Lens fiber major intrinsic protein OS=Rana pipiens... [more]
TIP22_ARATH1.360e-1335.37Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
AQP_AEDAE2.320e-1333.81Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP43_MAIZE3.029e-1336.05Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
AQP2_HUMAN3.029e-1335.66Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32014C01EF RVDevelop1 Citrus clementina cDNA clone C32014C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920879 ID=FC920879; Name=FC920879; organism=Citrus clementina; type=EST; length=601bp
TGACTATTTTGTGTTTTTGAGGGCGTAGCAGAAATGGAAGGCAAAGAAGA
GGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGA
CGGCGGCTCAGACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGGCG
CCGCTCTTCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGG
TATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGA
CAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATT
CAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTG
CACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCC
TGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTG
ATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTCAT
GGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCCACGTCGTAGCTC
ATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTT
G
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