FC920879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.273e-11 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 193 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI 471 RA I+EF+AT +F++ + +++ + K ST G + ++ A + V V ISGGH+NPA+T G L +LSL RALFY + Q LGA+ Sbjct: 27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAV 120
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 45/142 (31.69%), Postives = 75/142 (52.82%), Query Frame = 1 Query: 193 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLG----AEIIGTF 600 +AG+AEFI+TF+F++ + + K ++ + G+ + A +FV V A ISGGH+NPAVT G F+ ++L R + Y++ Q LG+I + ++ + V A G ++G G+G EI+ TF Sbjct: 21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLV----------FVTASSVPAFGLSEGVGVGPALVLEIVMTF 152
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 1 Query: 118 DGKDYVEPPPAP----LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQY----GRLAGGAH 540 D +D + P AP + G S++F + +AEF+ATF ++ +G + K V G+A A+G + +VY +SG H+NPAVTLG +A + RA Y + Q A A VV M G++ L GGAH Sbjct: 28 DKEDDHQNPQAPDGGDVVVCGMPMSFTFLQMLLAEFLATFFLMFAG----LGAITVEEKKGAVTFPGVAVAWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQ-TAAATAASVVLRLMFGGRHAPVPATLPGGAH 171
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 1 Query: 169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGT 597 EL+S SF+RA AEF AT +++ + + + + + +A AFG + LV ISG H+NPAVT + ++SL RA Y+ Q LGA+ GA V+ G LA + + G + G EI T Sbjct: 1 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLT 136
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLA 528 EL+S SF+RA AEF AT +++ + + + + +A AFG + LV ISG H+NPAVT + ++SL RA YM Q LGA+ GA V+ G LA Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA 117
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 51/147 (34.69%), Postives = 71/147 (48.30%), Query Frame = 1 Query: 184 SFYRAGIAEFIATF-LFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV-------KGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGTF 600 S + +AEFI TF L L V+ N +G G++ AFG + + + ISG HINPAV++GL+ A++ T L Y+ Q LG I GAGV+ GF +G + G H GYT L E++ TF Sbjct: 2 SLVKRSVAEFIGTFWLVLGGCGAAVLAAAFPNLG---IGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPG-GYTLLACLVCEVVMTF 144
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 178 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 489 S +F RA ++EF+AT LF++ + + + N + + IA AFG I LV ISG HINPAVT+ + +S RALFY+ Q LGA+ GA ++ Sbjct: 1 SIAFSRAVLSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 193 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI 471 RA I+EFIAT +F++ + +V+ + K ST G + +A A + V V ISGGH+NPAVT G + ++SL RA+ Y V Q LGA+ Sbjct: 26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAV 119
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11 Identity = 47/143 (32.87%), Postives = 68/143 (47.55%), Query Frame = 1 Query: 169 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAHVVAHGYTKGDGLGAEIIGT 597 EL+S SF+RA AEF AT +++ + + + + +A AFG + LV ISG H+NPAVT + ++SL RA Y+ Q LGA+ GA V+ G LA + + G + G EI T Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLT 138
BLAST of FC920879 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 178 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 489 S +F RA AEF+AT +F++ + + + N + S + IA AFG I LV ISG HINPAVT+ + +S RA FY+ Q LGA+ GA ++ Sbjct: 1 SIAFSRAVFAEFLATLIFVFFGLGSAL-----NWQQSLPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99 The following BLAST results are available for this feature:
BLAST of FC920879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920879 ID=FC920879; Name=FC920879; organism=Citrus clementina; type=EST; length=601bpback to top |