FC920880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC_ARATH (V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 3.720e-90 Identity = 163/200 (81.50%), Postives = 180/200 (90.00%), Query Frame = 1 Query: 67 MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASY 666 M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGT +KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E+VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEHLVTLLAVVPKYSQKDWLA Y Sbjct: 1 MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLLKSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEVVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEHLVTLLAVVPKYSQKDWLACY 200
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC_HORVU (V-type proton ATPase subunit C OS=Hordeum vulgare GN=VATC PE=1 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 6.812e-76 Identity = 141/205 (68.78%), Postives = 166/205 (80.98%), Query Frame = 1 Query: 67 MASRYWVVSLPV--QNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASY 666 MA+RYW+ +LPV N AA ++W RLQE IS+HSFDTPLYRF +P+LR GT VKSN F+E VSHKIRRQIE+LER G+E +L+VDGVPVD+YLTRFVWDE KYP +PL+E V I + VAKIEDD+KVRVAEY NV+SQL AINRKQ+GSLAVRDLSNL+KPED++TSEHLVTLL++VPKYSQKDWLASY Sbjct: 1 MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTLDSLLALSDDLVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVNAPLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDMVTSEHLVTLLSIVPKYSQKDWLASY 205
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC1_PONAB (V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.710e-32 Identity = 74/200 (37.00%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ Y Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC1_MACFA (V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.710e-32 Identity = 74/200 (37.00%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ Y Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC1_HUMAN (V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4) HSP 1 Score: 138.658 bits (348), Expect = 2.710e-32 Identity = 74/200 (37.00%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ Y Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC1_BOVIN (V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 7.884e-32 Identity = 73/200 (36.50%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ Y Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC1_RAT (V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.030e-31 Identity = 73/200 (36.50%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ Y Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC1_MOUSE (V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4) HSP 1 Score: 136.732 bits (343), Expect = 1.030e-31 Identity = 73/200 (36.50%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVPK + DW+ Y Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VTC1A_DANRE (V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31 Identity = 72/200 (36.00%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W++L ++ + + +FNIP+L+VGT K ++FVESV K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V++I++DLK R + YNN++ L + RK +GSL R L+++VK +D ++ SE+L+TLL VVPK + DW +Y Sbjct: 2 TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKLDAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNISEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEYLITLLVVVPKTNYTDWQRTY 201
BLAST of FC920880 vs. ExPASy Swiss-Prot
Match: VATC1_XENTR (V-type proton ATPase subunit C 1 OS=Xenopus tropicalis GN=atp6v1c1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31 Identity = 71/200 (35.50%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 73 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASY 666 + +W++S P + + W +L +K++ + +FNIP+L+VGT K ++FVE K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+L+TLL VVPK + DW+ Y Sbjct: 2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGTVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYNDWVKQY 201 The following BLAST results are available for this feature:
BLAST of FC920880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920880 ID=FC920880; Name=FC920880; organism=Citrus clementina; type=EST; length=666bpback to top |