FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27 Identity = 56/157 (35.67%), Postives = 98/157 (62.42%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 +K+V +GD +VGK++++ RF ++F +ATIG+DF +K++ ++++T+ Q WDTAGQERFR++ Y R + SF N ++W++E+R D++I++VGNK+DL R+V +E +A + + F+ETSA N+ F ++ Sbjct: 11 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERL 167
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27 Identity = 57/161 (35.40%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +K + +GD VGK+ ++ +F +F + TIG++F ++ + ++++ ++LQ+WDTAGQE FRS+ SY R R++F + + W+++ R +++ I+LVGNK DL +R VS EEGE ++E ++F+E SAK N++ F K A A+ Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAI 167
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27 Identity = 55/154 (35.71%), Postives = 97/154 (62.99%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 589 +K + +GD VGK+ ++ +F +F + T+G++F ++ + ++ + ++LQ+WDTAGQE FRS+ SY R R +F + + W+++ R S+++I+L+GNK+DL +R+V EEGEA +RE ++F+ETSAK N++ F Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27 Identity = 57/161 (35.40%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +K + +GD VGK+ ++ +F +F + TIG++F ++ + ++++ ++LQ+WDTAGQE FRS+ SY R R++F + + W+++ R +++ I+LVGNK DL +R VS EEGE ++E ++F+E SAK N++ F K A A+ Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAI 167
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB26_DROME (Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27 Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 107 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFD-NTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV-EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 P +K + LGD VGKTS + ++ +F ++ AT+GI +K + ++ V+LQ+WDTAGQERFRS+ +Y R + ++ N W+ E+R DV+IVL+GNK D +RQV E+GE RE NV F+ETSAK G N++ F +A L Sbjct: 184 PFDDTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL 353
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27 Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++SF N +W+ E+ +V +LVGNK DL K+ V + + L + F+ETSAK N++ F +AA + Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27 Identity = 60/161 (37.27%), Postives = 96/161 (59.63%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++S+ N +W+ E+ +V +LVGNK+DL K+ V + + L V F+ETSAK N++ F +AA + Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 56/157 (35.67%), Postives = 92/157 (58.60%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 +KL+ +G+ SVGKTS + R+ D F + + +T+GIDF KT++ ++ ++LQ+WDTAGQER+R++ +Y R +SF W +++T + ++L GNK D+ ++R VS E G+ +L F ETSAK N+K F ++ Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERL 187
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 56/157 (35.67%), Postives = 92/157 (58.60%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 +KL+ +G+ SVGKTS + R+ D F + + +T+GIDF KT++ ++ ++LQ+WDTAGQER+R++ +Y R +SF W +++T + ++L GNK D+ ++R VS E G+ +L F ETSAK N+K F ++ Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERL 187
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 60/161 (37.27%), Postives = 96/161 (59.63%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++S+ N +W+ E+ +V +LVGNK+DL K+ V + + L V F+ETSAK N++ F +AA + Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |