FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 59/161 (36.65%), Postives = 96/161 (59.63%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++S+ N +W+ E+ +V +LVGNK+DL K+ V + + L + F+ETSAK N++ F +AA + Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 59/161 (36.65%), Postives = 96/161 (59.63%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++S+ N +W+ E+ +V +LVGNK+DL K+ V + + L + F+ETSAK N++ F +AA + Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 59/161 (36.65%), Postives = 96/161 (59.63%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++S+ N +W+ E+ +V +LVGNK+DL K+ V + + L + F+ETSAK N++ F +AA + Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++SF N +W+ E+ +V +LVGNK DL K+ V + + L + F+ETSAK N++ F +AA + Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++SF N +W+ E+ +V +LVGNK DL K+ V + + L + F+ETSAK N++ F +AA + Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++SF N +W+ E+ +V +LVGNK DL K+ V + + L + F+ETSAK N++ F +AA + Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27 Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R ++SF N +W+ E+ +V +LVGNK DL K+ V + + L + F+ETSAK N++ F +AA + Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27 Identity = 58/169 (34.32%), Postives = 96/169 (56.80%), Query Frame = 2 Query: 116 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 622 A+ + K+ LGD VGK+SI+ RF+ D FD+ TIG F++KT+ + + +WDTAGQERF SL P Y R + SF KW+ E++ ++++ + GNK DL + R+V +++ + + + + +ETSAK NI+ LF+ I+ +P ++ Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLD 170
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27 Identity = 61/172 (35.47%), Postives = 99/172 (57.56%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSK 643 +KL+ +GD VGK+ ++ RF D + ++ +TIG+DF +T+ L +T++LQ+WDTAGQERFR++ SY R + +F N +W+ E+ +V +LVGNK+DLV K+ V +A + L + F+ETSAK N++ F +A + T S ++ Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQ 180
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27 Identity = 64/154 (41.56%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 589 +KL+ +GD VGKT ++ RF D F+ T+ +TI IDF KT+ L+ + ++LQ+WDTAGQERF ++ SY R +SF N SKW+ + DV +L+ NK D+ KR V +GE +RE + F ETSAKA NI+ F Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLRNKCDMDHKRVVPKGKGEQIAREHRIRFFETSAKANINIEKAF 163 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |