FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RB33B_HUMAN (Ras-related protein Rab-33B OS=Homo sapiens GN=RAB33B PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.916e-18 Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR-SLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTE-RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAK 562 +K++ +GD +VGKT + RF +F + +ATIG+DF + + ++ +++QLWDTAGQERFR S++ Y R SF + WI+E + +D+ +LVGNK DL QV + + + ++ ETSAK Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK 180
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RB33B_MOUSE (Ras-related protein Rab-33B OS=Mus musculus GN=Rab33b PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18 Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR-SLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTE-RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAK 562 +K++ +GD +VGKT + RF +F + +ATIG+DF + + ++ +++QLWDTAGQERFR S++ Y R SF + WI+E + +D+ +LVGNK DL QV + + + ++ ETSAK Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK 180
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 51/157 (32.48%), Postives = 84/157 (53.50%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 +L +GD VGKTSI +F+ + F N Y TI D K ++D+ L + DTAGQ+ ++ +I+ R SF ++D+++ + V I+++ NK+DL ++RQV+ +EGE + + F+E SAK NI +F +IA Sbjct: 16 RLCVMGDGGVGKTSITIQFISNHFVNCYDPTIE-DLYRKQCLIDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQIQSFLDQIKFLKSEKVPIIMIANKSDLDDERQVTYQEGENFANRFGMSFMEVSAKYKLNIDEVFNQIA 171
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RB33B_CHICK (Ras-related protein Rab-33B OS=Gallus gallus GN=RAB33B PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18 Identity = 51/147 (34.69%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR-SLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTE-RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAK 562 +K++ +GD +VGKT + RF +F +ATIG+DF + + ++ +++QLWDTAGQERFR S++ Y R SF + WI+E + +D+ +LVGNK DL QV + + + ++ ETSAK Sbjct: 32 FKIIVIGDSNVGKTCLTYRFCAGRFPQRTEATIGVDFRERAVTIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNLASFHSLPSWIEECKQHLLTNDIPRILVGNKCDLRNAIQVPTDLAQKFADTHSMPLFETSAK 178
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB38_MOUSE (Ras-related protein Rab-38 OS=Mus musculus GN=Rab38 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18 Identity = 58/159 (36.48%), Postives = 85/159 (53.46%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTE----RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELN----VMFIETSAKAGFNI 577 YKL+ +GD VGKTSII R+++ F + Y+ATIG+DF K ++ + T VRLQLWD AGQERF ++ Y R +F +KW +++ ++ G V +VL+ NK D + + V + G + V + ETSAK NI Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLANKCD--QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINI 166
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB38_HUMAN (Ras-related protein Rab-38 OS=Homo sapiens GN=RAB38 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18 Identity = 58/159 (36.48%), Postives = 85/159 (53.46%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTE----RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELN----VMFIETSAKAGFNI 577 YKL+ +GD VGKTSII R+++ F + Y+ATIG+DF K ++ + T VRLQLWD AGQERF ++ Y R +F +KW +++ ++ G V +VL+ NK D + + V + G + V + ETSAK NI Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLLANKCD--QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINI 166
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RALA_DROME (Ras-related protein Ral-a OS=Drosophila melanogaster GN=Rala PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.622e-17 Identity = 51/179 (28.49%), Postives = 97/179 (54.19%), Query Frame = 2 Query: 107 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQS 640 P + A +K++ +G VGK+++ +FMYD+F Y+ T D K + L+ V++ + DTAGQE + ++ +Y R +SF T ++ +++ R + + +LVGNK DL +KR+V + E + ++++ V ++ETSAK N+ +F + + +T S++ Sbjct: 5 PTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKA-DSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKA 182
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB24_DICDI (Ras-related protein Rab-24 OS=Dictyostelium discoideum GN=rab24 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.622e-17 Identity = 56/160 (35.00%), Postives = 89/160 (55.62%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK---RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 K+V LG SVGKT I+TR+ +F +T+ TIG F SK + + + V L +WDTAG ER++++ SY R R+S+ + W +E+ T+ ++ I +VG K DL+++ + V EE + +R ETS++ G N+ LF+ IA Sbjct: 9 KVVLLGYASVGKTCIVTRYTSGQFGDTH-TTIGGAFSSKRVVVGETEVLLGIWDTAGTERYQAVNVSYYRRANAAIVCYDLTNRESWEKVTFWAEEL-TQNEPEIEIYIVGTKLDLIQQGDIKAVPEEEVKQTARRYKAHIFETSSRTGENVSLLFQTIA 166
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAP2A_PONAB (Ras-related protein Rap-2a OS=Pongo abelii GN=RAP2A PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.119e-17 Identity = 56/161 (34.78%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 + +YK+V LG VGK+++ +F+ F Y TI DF K + ++ L++ DTAG E+F S+ YI+ +QSF + D++ R +R V ++LVGNK DL +R+VS EG A + E F+ETSAK+ + LF +I Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNEGRALAEEWGCPFMETSAKSKTMVDELFAEI 160
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAP2A_MOUSE (Ras-related protein Rap-2a OS=Mus musculus GN=Rap2a PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.119e-17 Identity = 56/161 (34.78%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 + +YK+V LG VGK+++ +F+ F Y TI DF K + ++ L++ DTAG E+F S+ YI+ +QSF + D++ R +R V ++LVGNK DL +R+VS EG A + E F+ETSAK+ + LF +I Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNEGRALAEEWGCPFMETSAKSKTMVDELFAEI 160 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |