FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RB32A_DICDI (Ras-related protein Rab-32A OS=Dictyostelium discoideum GN=rab32A PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16 Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV--RTERGSD---VIIVLVGNKTDLVEKRQVSIEEGEAKSRELN--VMFIETSAKAGFNIKPLFR 592 YK++ +GD GKTSII RF+++ F Y++TIG+DF K + + +T VRLQLWD AGQERF S+ Y + +F +KW ++ + G+D + +VL+ NK DL + + K + N + + ETSAK NI+ R Sbjct: 16 YKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLLANKCDLGKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAAR 178
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RABM_DICDI (Ras-related protein RabM OS=Dictyostelium discoideum GN=rabM PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16 Identity = 55/157 (35.03%), Postives = 76/157 (48.41%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-KRQVSIEEGEAKSREL-------NVMFIETSAKAGFNI 577 K++ LGD VGKTS+ F+ K++ + T+ F SKT+ +E+ V L +WDT QERF L P Y R +SF N KW+DE R V VL+G K D+ + +S E E + + V + ETSAK NI Sbjct: 7 KIITLGDSYVGKTSVFNNFVTGKYEIN-ECTVSPSFYSKTLTIENEPVILNVWDTCSQERFNGLSPIYYRWSNCYTLCFDIHNEKSFKNLDKWMDEARKFCIGKVPFVLIGTKKDIPRTDKSISKERIEQWCKNIEDQGIIDRVHYFETSAKFSQNI 162
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASY_DICDI (Ras-like protein rasY OS=Dictyostelium discoideum GN=rasY PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16 Identity = 51/156 (32.69%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRK 595 KL +GD VGKTS+ +F+ + F + Y TI D K ++D+ L + DTAGQ+ ++ +IR R SF + +++ R DV I+++GNK+DL ++RQV+ +EG+ +R L + F+E SAK N++ +F + Sbjct: 12 KLCIMGDGGVGKTSVTIQFISNHFVHYYDPTIE-DSYRKQCLIDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTFQEGKDLARCLGMSFMEVSAKTRLNVEEVFNE 166
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASX_DICDI (Ras-like protein rasX OS=Dictyostelium discoideum GN=rasX PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16 Identity = 53/174 (30.46%), Postives = 91/174 (52.30%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKKK 649 KL +GD VGKT++ +F+ + F + Y TI D K ++D+ L + DTAGQ+ ++ +IR R SF + + +++ R DV I+++GNK+DL ++RQV+ +EG+ +R + F+E SAK NI+ +F + + L ++ K K Sbjct: 11 KLCIMGDGGVGKTAVTIQFISNHFVHYYDPTIE-DSYRKQCVIDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSVTSRSSFDQIAFFKEQINRVLDSDDVPIMMIGNKSDLDDERQVTYQEGKDLARCFGMSFMEVSAKTRSNIEEVFNETVRCVKRKYDLHNKDKSK 183
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: DJC27_DANRE (DnaJ homolog subfamily C member 27 OS=Danio rerio GN=dnajc27 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16 Identity = 49/170 (28.82%), Postives = 85/170 (50.00%), Query Frame = 2 Query: 125 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGS-----DVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 619 + K++ LG+ VGK+ II R+ +F Y ATIGID+ + + DR +++ ++D AG F + + + R+SF W+ E++ E GS ++I V+ NK DL ++R V EG + + ETSA++G I +F+ +++ M Sbjct: 16 RVKVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDSQGVILVYDVGLRESFDALDSWLTEMKQEMGSQANMENIIFVVCANKVDLTKRRVVDESEGRLWAESRGFHYFETSAQSGEGINEMFQSFFSSITDM 185
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB32_MOUSE (Ras-related protein Rab-32 OS=Mus musculus GN=Rab32 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16 Identity = 56/164 (34.15%), Postives = 83/164 (50.61%), Query Frame = 2 Query: 104 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDE----VRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVM-FIETSAKAGFNI 577 AP + +K++ +G+ VGKTSII R+++ F Y+ATIG+DF K + + RT VRLQLWD AGQERF ++ Y + +F KW ++ V GS + VL+ NK D + S + + ++ + ETSAK NI Sbjct: 16 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLLANKCDQKKDNSQSPSQMDQFCKDHGFTGWFETSAKDNINI 179
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN_TETTH (GTP-binding nuclear protein Ran OS=Tetrahymena thermophila PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16 Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = 2 Query: 113 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD----LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 631 + +A++KLV +GD VGKT+ +TR +F+ Y AT G++ + +Y +R +WDTAGQE+ L Y R ++ N KW ++ T ++ IVLVGNK D V+ RQ++ R+ ++ + + SAK+ + + F I L G TL+ Sbjct: 7 NVVAEFKLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMVLYTTKGPIRFNIWDTAGQEKLGGLREGYYIGANAAIMMFDVTSRITYKNIPKWHKDL-TRICENIPIVLVGNKVDSKDRKVKARQITFH------RKRSLQYYDVSAKSNYQYEKPFLWILRKLTGDPTLN 176
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RABL_MIMIV (Probable Rab-related GTPase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R214 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16 Identity = 49/160 (30.63%), Postives = 86/160 (53.75%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKS--RELNVMFIETSAKAGFNIKPLFRKI 598 YK++ +G VGK+SI+ +F++++ + TIG F SK + ++ +T++L +WDTAGQERFRS+ Y R+SF + WI+++R + I++V NK D ++K + E E K R+ + ++ S+ + LF K+ Sbjct: 14 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKID-IDKNNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGKM 172
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4) HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16 Identity = 49/164 (29.88%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 113 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVI-IVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 S + +YKLV +G VGK+++ + F + Y TI D K + ++D L + DTAGQE + ++ Y+R + S + ++ + +D + IV+VGNK+DL ++QVS ++G ++++N F+ETSAK N++ F +A Sbjct: 6 SNIREYKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIE-DSYRKQVVIDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEAFYTLA 168
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16 Identity = 51/161 (31.68%), Postives = 79/161 (49.07%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVI-IVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 L +YKLV +G VGK+++ +F+ F + Y TI D K ++D L + DTAGQE + ++ Y+R R SF S + ++ + D +V+V NK DL +RQV + EG +R F+ETSAK N+ F+ + Sbjct: 8 LREYKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIE-DSYRKQCVIDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVVVANKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDL 167 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |