FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB28_RAT (Ras-related protein Rab-28 OS=Rattus norvegicus GN=Rab28 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLE-DRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRT---ERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 622 K+V LGD + GKTS+ T F + F Y+ TIG+DF + + L + V LQ+WD GQ ++ YI QSF N W V+T E + ++ LVGNK DL R V ++ +E SAK G ++ F+K+AA + G++ Sbjct: 14 KIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHMRTVKPDKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIK 181
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB28_HUMAN (Ras-related protein Rab-28 OS=Homo sapiens GN=RAB28 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 54/168 (32.14%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLE-DRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKW---IDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 622 K+V LGD + GKTS+ T F + F Y+ TIG+DF + + L + V LQ+WD GQ ++ YI QSF N W + +V E + ++ LVGNK DL R + E+ +E SAK G ++ F+K+AA + G++ Sbjct: 14 KIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIK 181
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASL_COPCI (24 kDa Ras-like protein OS=Coprinopsis cinerea GN=CC-RAS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 50/161 (31.06%), Postives = 78/161 (48.45%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVI-IVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 L +YKLV +G VGK+++ +F+ F + Y TI D K ++D L + DTAGQE + ++ Y+R R SF S + ++ + D +++V NK DL +RQV + EG ++ FIETSAK N+ F + Sbjct: 8 LREYKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIE-DSYRKQCIIDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKDQDSFPVIVVANKCDLEYERQVGMNEGRDLAKHFGCKFIETSAKQRINVDEAFSNL 167
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAS3_DROME (Ras-like protein 3 OS=Drosophila melanogaster GN=R PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKKK 649 + +YK+V LG VGK+++ +F+ F Y TI D K + ++ + L++ DTAG E+F ++ Y++ + +F + +++ R + DV +VLVGNK DL E+R V E G+ + + N F+ETSAKA N+ +F + + Q K K Sbjct: 1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINKKSPEKKQKKPK 177
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 51/167 (30.54%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL 628 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G + L Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNL 177
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 51/167 (30.54%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL 628 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G + L Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNL 177
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB28_BOVIN (Ras-related protein Rab-28 OS=Bos taurus GN=RAB28 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 55/168 (32.74%), Postives = 80/168 (47.62%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLE-DRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKW---IDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 622 K+V LGD + GKTS+ T F + F Y+ TIG+DF + + L V LQ+WD GQ ++ YI QSF N W + +V E + ++ LVGNK DL R V E+ +E SAK G ++ F+K+AA + G++ Sbjct: 14 KIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGSLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDVTNYQSFENLEDWYSVVKKVSEESETQPLVALVGNKIDLEHMRTVKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIK 181
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASW_DICDI (Ras-like protein rasW OS=Dictyostelium discoideum GN=rasW PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14 Identity = 52/173 (30.06%), Postives = 86/173 (49.71%), Query Frame = 2 Query: 134 LVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKKK 649 L +GD VGKT++ +F+ + F Y TI D K ++D+ L + DTAGQ+ ++ +IR R SF + +++ R DV I+++GNK DL ++RQV+ +EG+ +R L + F+E SAK N++ +F + + E S K Sbjct: 12 LCIMGDGGVGKTAVTIQFISNHFVYYYDPTIE-DSYRKQCLVDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQIQFFREQIIRVLDSDDVPIMMIGNKIDLDDERQVTFQEGKDLARCLGMSFMEVSAKNRTNVEEVFNETVRIVKRKEDPQSHKPSK 183
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB28_PONAB (Ras-related protein Rab-28 OS=Pongo abelii GN=RAB28 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14 Identity = 54/168 (32.14%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLE-DRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKW---IDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 622 K+V LGD + GKTS+ T F + F Y+ TIG+DF + + L + V LQ+WD GQ ++ YI QSF N W + +V E + ++ LVGNK DL R + E+ +E SAK G ++ F+K+AA + G++ Sbjct: 14 KIVVLGDGASGKTSLATCFAQETFGKRYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETRPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIK 181
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RSR1_YEAST (Ras-related protein RSR1 OS=Saccharomyces cerevisiae GN=RSR1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 54/156 (34.62%), Postives = 84/156 (53.85%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKTDLVEKRQVSIEEG-EAKSRELNVMFIETSAKAGFNIKPLF 589 YKLV LG VGK+ + +F+ + +TY TI D KT+ ++++ L++ DTAG +F ++ YI+ RQS + ++V + SD V +VL+GNK DL+ +R +S+EEG E S+ V F ETSA N+ +F Sbjct: 4 YKLVVLGAGGVGKSCLTVQFVQGVYLDTYDPTIE-DSYRKTIEIDNKVFDLEILDTAGIAQFTAMRELYIKSGMGFLLVYSVTDRQSLEELMELREQVLRIKDSDRVPMVLIGNKADLINERVISVEEGIEVSSKWGRVPFYETSALLRSNVDEVF 158 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |