FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASB_DICDI (Ras-like protein rasB OS=Dictyostelium discoideum GN=rasB PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 54/180 (30.00%), Postives = 89/180 (49.44%), Query Frame = 2 Query: 110 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKK 646 +S +YKLV +G VGK+++ +F+ + F Y TI D + +++ T L + DTAGQ+ + ++ Y+R R SF + +++ R + V IVLVGNK DL R+V+ EG ++ +V F+ETSAK N+ F ++ + +SKK Sbjct: 1 MSVSNEYKLVVMGGGGVGKSALTIQFIQNHFIEEYDPTIE-DSYRRQCQVDEDTCLLDILDTAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINVVREQIIRVKDNDKVPIVLVGNKCDLENLREVTEGEGSELAKSFSVPFLETSAKKRLNVDECFFEVVREIKKSLKEPGRSKK 179
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 51/179 (28.49%), Postives = 94/179 (52.51%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELN-VMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKKK 649 + +YKLV LG VGK+++ +F+ F Y TI D K + ++ + L++ DTAG E+F ++ Y++ + +F + +++ R + DV I+LVGNK DL ++R V E+G+ +R+ N F+E+SAK+ N+ +F + + + +++KK Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPIILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKK 178
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: DJ27B_XENLA (DnaJ homolog subfamily C member 27-B OS=Xenopus laevis GN=dnajc27-B PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 44/170 (25.88%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 125 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERG--------SDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 610 + K++ +G+ VGK+ II R+ +F YQATIGID+ + ++DR +++ ++D AG F + + + ++SF + W+ E++ E G +++ + NK D + R V EG S ++ ETSA++G I +F+ +++ Sbjct: 16 RIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVQIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFESLDAWLAEMKQELGPQINIDNLDNIVFAVCANKIDSTKHRCVDESEGRLWSESKGFLYFETSAQSGEGINEMFQAFYSSI 185
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAYL_BOVIN (Putative GTP-binding protein RAY-like OS=Bos taurus GN=RABL4 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 52/162 (32.10%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYD--KFDNTYQATIGIDFLSKTMYLEDR--TVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTE-RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 K + GD +VGKT++ F D F Y T G+D + KT+ + D +V L ++D+AG+E F ++ QSF N SKW+++ R++ G+ + VLVGNKTDL +R V + + +A + + ETS K N + F +A Sbjct: 7 KCILAGDPTVGKTALAQLFRSDGAHFQKNYTLTTGVDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEQSFTNCSKWLEKARSQIPGTTLPGVLVGNKTDLAGRRVVDVAQAQAWALGQGLECFETSVKEMENYEAPFHYLA 168
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASH_MSVHA (Transforming protein p29 OS=Harvey murine sarcoma virus GN=H-RAS PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 104 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 589 APV A+ +YKLV +G + VGK+++ + + + F + Y TI D K + ++ T L + DT GQE + ++ Y+R +SF + ++ +++ R + DV +VLVGNK DL R V + + +R + +IETSAK ++ F Sbjct: 48 APVEAMTEYKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-GRTVESRQAQDLARSYGIPYIETSAKTRQGVEDAF 208
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |