FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN1B_LOTJA (GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 2 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 161
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN1A_LOTJA (GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 2 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 161
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASM_HUMAN (Ras-related protein M-Ras OS=Homo sapiens GN=MRAS PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14 Identity = 54/183 (29.51%), Postives = 89/183 (48.63%), Query Frame = 2 Query: 107 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAK-AGFNIKPLFRKIAAALPGMETLSSQSKKK 649 P L YKLV +GD VGK+++ +F F Y TI +L T ++++ L + DTAGQE F ++ Y+R + SF + ++ + R + ++LV NK DL+ R+++ E+G+ + + N+ +IETSAK N+ F + + SQ KKK Sbjct: 7 PSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTE-IDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQIPEKSQKKKK 188
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASH_RRASV (Transforming protein p29 OS=Rasheed rat sarcoma virus GN=RAS PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14 Identity = 50/163 (30.67%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 104 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 589 APV A+ +YKLV +G + VGK+++ + + + F + Y TI D K + ++ T L + DTAGQE + ++ Y+R +SF + ++ +++ R + DV +VLVGNK DL V + + +R + +IETSAK ++ F Sbjct: 55 APVEAMTEYKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-AHTVESRQAQDLARSYGIPYIETSAKTRPGVEDAF 215
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAC9_ARATH (Rac-like GTP-binding protein ARAC9 OS=Arabidopsis thaliana GN=ARAC9 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14 Identity = 58/201 (28.86%), Postives = 95/201 (47.26%), Query Frame = 2 Query: 83 SLLTLKMAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLN-TSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQ----------VSIEEGEAKSRELNVM-FIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKKK 649 S+ + +A K V +GD +VGKT ++ + + F Y T+ D + + ++ +TV L LWDTAGQE + + P R R SF N KW+ E+R V IVLVG K+DL + Q + E+G+ +E+ + +IE S+KA N+K +F + + + + + K+K Sbjct: 4 SMAATSTSSATATTFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFNANVLVDGKTVNLGLWDTAGQEDYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELR-HYAPTVPIVLVGTKSDLRDNMQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVLHPPSKTKKRKRK 202
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAP1B_XENTR (Ras-related protein Rap-1b OS=Xenopus tropicalis GN=rap1b PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14 Identity = 50/179 (27.93%), Postives = 94/179 (52.51%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSREL-NVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKKK 649 + +YKLV LG VGK+++ +F+ F Y TI D K + ++ + L++ DTAG E+F ++ Y++ + +F + +++ R + DV ++LVGNK DL ++R V E+G+ +R+ N F+E+SAK+ N+ +F + + + +++KK Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKK 178
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAP1B_XENLA (Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14 Identity = 50/179 (27.93%), Postives = 94/179 (52.51%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSREL-NVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKKK 649 + +YKLV LG VGK+++ +F+ F Y TI D K + ++ + L++ DTAG E+F ++ Y++ + +F + +++ R + DV ++LVGNK DL ++R V E+G+ +R+ N F+E+SAK+ N+ +F + + + +++KK Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKK 178 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |