FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RASK_CYPCA (GTPase KRas OS=Cyprinus carpio GN=kras PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL-PGMETLSSQSKKK 649 + +YKLV +G VGK+++ + + + F + Y TI D K + ++ T L + DTAGQE + ++ Y+R +SF + + +++ R + DV +VLVGNK DL R V ++ + +R + FIETSAK + F + + E +S + KKK Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRSVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKEKMSKEGKKK 177
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAPA_DISOM (Ras-related protein O-Krev OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 51/179 (28.49%), Postives = 92/179 (51.40%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEV-RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSREL-NVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSQSKKK 649 + +YKLV LG VGK+++ +F+ F Y TI D K + ++ + L++ DTAG E+F ++ Y++ + +F + +++ R + DV ++LVGNK DL ++R V E+G+ +R+ N F+E+SAK+ N+ +F + + + KKK Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDCQPCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKAPVEKCKKKK 178
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN_SALSA (GTP-binding nuclear protein Ran OS=Salmo salar GN=ran PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 101 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKW-IDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKS----RELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 MA ++KLV +GD GKT+ + R + +F+ Y AT+G++ + ++ +WDTAGQE+F L Y R ++ N W D VR ++ IVL GNK D+ +++ +AKS R+ N+ + + SAK+ +N + F +A L G Sbjct: 1 MAEGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CENIPIVLCGNKVDIKDRKV------KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 169
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN_DANRE (GTP-binding nuclear protein Ran OS=Danio rerio GN=ran PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 101 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKW-IDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKS----RELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 MA ++KLV +GD GKT+ + R + +F+ Y AT+G++ + ++ +WDTAGQE+F L Y R ++ N W D VR ++ IVL GNK D+ +++ +AKS R+ N+ + + SAK+ +N + F +A L G Sbjct: 1 MAENEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CENIPIVLCGNKVDIKDRKV------KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 169
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN4_ARATH (GTP-binding nuclear protein Ran-4 OS=Arabidopsis thaliana GN=RAN4 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 48/171 (28.07%), Postives = 83/171 (48.54%), Query Frame = 2 Query: 119 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 631 L +KL+ +GD GKT+ + R + +F++ + T+G+D + +R + WDTAGQE++ L +Y R +++N +W ++R ++ IVL GNK D V RQ+ + + R+ + + E SAK N + F +A + G LS Sbjct: 11 LPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLR-RVCKNIPIVLCGNKVD-VPSRQIK-PKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLS 178
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN3_ORYSJ (GTP-binding nuclear protein Ran-3 OS=Oryza sativa subsp. japonica GN=RAN3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 49/163 (30.06%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KL+ +GD GKT+ + R + +F+ Y+ TIG++ + VR WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D+ + RQV + R+ N+ + E SAK+ +N + F +A L G Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQEKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDI-CRVCDNIPIVLCGNKVDM-KNRQVKAKM-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLTG 177
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN3_ORYSI (GTP-binding nuclear protein Ran-3 OS=Oryza sativa subsp. indica GN=RAN3 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 49/163 (30.06%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KL+ +GD GKT+ + R + +F+ Y+ TIG++ + VR WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D+ + RQV + R+ N+ + E SAK+ +N + F +A L G Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQEKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDI-CRVCDNIPIVLCGNKVDM-KNRQVKAKM-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLTG 177
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSJ (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. japonica GN=RAN2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 50/163 (30.67%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSI (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. indica GN=RAN2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 50/163 (30.67%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 616 +KLV +GD GKT+ + R + +F+ Y+ TIG++ +R WDTAGQE+F L Y R ++ N W ++ ++ IVL GNK D V+ RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RBL2A_HUMAN (Rab-like protein 2A OS=Homo sapiens GN=RABL2A PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 589 K++ LGD +VGK+ ++ RF+ D F +T + T ++ +T+ + WDTAGQERF+S+ SY + ++ N S W E+R R ++ ++V NK D + Q S AK L + F+ SA G N+ LF Sbjct: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFR-PEIPCIVVANKIDDINVTQKSF--NFAKKFSLPLYFV--SAADGTNVVKLF 170 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |