FC920882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.414e-29 Identity = 63/158 (39.87%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 +KL+ +GD VGKT +I RF D F++TY +TIGIDF +T+ +E + ++LQ+WDTAGQERF+++ +Y R +SF N W+ ++ + V +L+GNK D+ KRQV E+ E +RE + F ETSAK+ N+ F +A Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLA 166
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.414e-29 Identity = 67/158 (42.41%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 +KL+ +GD VGKT ++ RF D F+ T+ +TIGIDF KT+ L + ++LQ+WDTAGQERF ++ SY R +SF N SKW+ + DV +L+GNK D+ +KR V +GE +RE + F ETSAKA NI+ F +A Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLA 167
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: YPT5_SCHPO (GTP-binding protein ypt5 OS=Schizosaccharomyces pombe GN=ypt5 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 131 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV-EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 613 KLV LGD +VGK+S++ RF+ D+FD+ ++TIG FL++T+ +++ T V+L++WDTAGQER++SL P Y R S WI E++ + ++I L GNK DL E+R V + EA + E N++F ETSAK N+ LF IA LP Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLP 178
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 +KL+ +GD VGKT +I RF D F+NTY +TIGIDF +T+ +E + ++LQ+WDTAGQERF+++ +Y R +SF N W+ ++ + V +L+GNK D+ KR+V E+ + +RE + F ETSAK+ N+ F +A Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLA 166
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 +KL+ +GD VGKT +I RF D F+NTY +TIGIDF +T+ +E + ++LQ+WDTAGQERF+++ +Y R +SF N W+ ++ + V +L+GNK D+ KR+V E+ + +RE + F ETSAK+ N+ F +A Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLA 166
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 +KL+ +GD VGKT +I RF D F+NTY +TIGIDF +T+ +E + ++LQ+WDTAGQERF+++ +Y R +SF N W+ ++ + V +L+GNK D+ KR+V E+ + +RE + F ETSAK+ N+ F +A Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLA 166
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29 Identity = 66/158 (41.77%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 +KL+ +GD VGKT ++ RF D F+ T+ +TIGID KT+ L+ + ++LQ+WDTAGQERF ++ SY R +SF N SKW+ + DV +L+GNK D+ +KR V +GE +RE + F ETSAKA NI+ F +A Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 59/157 (37.58%), Postives = 101/157 (64.33%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 +K V +GD VGK++++ RF ++F+ ++TIG++F ++ + L+++ ++ Q+WDTAGQER+R++ +Y R + SF N +W+ E+R S+++I+LVGNKTDL+ R VS EE +A + E N+ FIETSA N++ F+ + Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTV 167
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 60/157 (38.22%), Postives = 102/157 (64.97%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 598 +K+V +GD VGK++I++RF ++F ++TIG++F ++T+ +E +TV+ Q+WDTAGQER+R++ +Y R RQ+F N +W+ E+R S+++I++ GNK+DL R VS E+G+A + + + F+ETSA NI+ F+ I Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTI 169
BLAST of FC920882 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 128 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 601 +KL+ +GD VGKT +I RF D F++TY +TIGIDF +T+ +E + ++LQ+WDTAGQERF+++ +Y R +SF N W+ ++ + V +L+GNK D+ KR+V E+ E +RE + F ETSAK+ N+ F +A Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLA 166 The following BLAST results are available for this feature:
BLAST of FC920882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920882 ID=FC920882; Name=FC920882; organism=Citrus clementina; type=EST; length=712bpback to top |