FC920893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_PYRKO (Flap structure-specific endonuclease OS=Pyrococcus kodakaraensis GN=fen PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.826e-40 Identity = 82/166 (49.40%), Postives = 114/166 (68.67%), Query Frame = 3 Query: 111 KEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 KE + ES +G+K+AIDA ++YQFL + + L + G +TSHL G F RTI L+EAG+KP YVFDG+PPD KK+EL KR R +A + EA+E G+ E+ +K++ R +V ++ +D K+LL+LMG+PVV+APSE EAQ A + VYA AS+D DSL Sbjct: 12 KEIELESLYGKKVAIDAFNAMYQFLSTIRQRDGTPLMDSQGRITSHLSGFFYRTINLMEAGIKPAYVFDGKPPDFKKRELEKRREAREEAEEKWYEALEKGDLEEAKKYAMRATRVNEELINDAKKLLELMGIPVVQAPSEGEAQAAYMAAKKAVYASASQDYDSL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_PYRHO (Flap structure-specific endonuclease OS=Pyrococcus horikoshii GN=fen PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.826e-40 Identity = 83/175 (47.43%), Postives = 116/175 (66.29%), Query Frame = 3 Query: 84 LADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 + D P+ KE E+ +G+KIAIDA +IYQFL + + L + G +TSHL G+F RTI L+EAG+KP YVFDG+PP+ K++EL KR R +A EA+ GN E+ K+++R KV + +D K+LL+LMG+P+++APSE EAQ A + G VYA AS+D DSL Sbjct: 5 IGDLVPR--KEIDLENLYGKKIAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAYVFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKVNEMLIEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_PYRAE (Flap structure-specific endonuclease OS=Pyrobaculum aerophilum GN=fen PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.609e-40 Identity = 83/184 (45.11%), Postives = 120/184 (65.22%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+ L KL+ + +E K ES G+ IA+DA ++YQFL + + L + AG +TSHL G+F RTI LLEAG++P+YVFDG+PP+ K E+ +R R A +++ A++ G +ED+ K++KR V +T + D+ KRLL MGVP V+APSE EAQ A + + G +AV S+D DSL Sbjct: 1 MGVTELGKLIGK---EVRREVKLESLSGKCIALDAYNALYQFLASIRQPDGTPLMDRAGRITSHLSGLFYRTINLLEAGIRPVYVFDGKPPEFKLAEIEERRKTREKAMEEVLRAIKEGRREDVAKYAKRAVFITSEMVDEAKRLLSYMGVPWVQAPSEGEAQAAYMARKGHCWAVGSQDYDSL 181
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_PYRAB (Flap structure-specific endonuclease OS=Pyrococcus abyssi GN=fen PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.938e-40 Identity = 82/166 (49.40%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 111 KEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 KE + E+ +G+KIAIDA +IYQFL + + L + G +TSHL G+F RTI L+EAG+KP+YVFDG+PP KK+EL KR R +A EA+ G+ E+ K+++R KV + +D K+LL+LMG+P+V+APSE EAQ A + G VYA AS+D DSL Sbjct: 12 KEIELENLYGKKIAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPVYVFDGKPPAFKKKELEKRREAREEAEIKWKEALAKGDIEEARKYAQRATKVNEMLIEDAKKLLQLMGIPIVQAPSEGEAQAAYMAGKGDVYASASQDYDSL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_THEON (Flap structure-specific endonuclease OS=Thermococcus onnurineus (strain NA1) GN=fen PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.214e-39 Identity = 80/166 (48.19%), Postives = 114/166 (68.67%), Query Frame = 3 Query: 111 KEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 KE + E+ +GR++AIDA +IYQFL + + L + G +TSHL G+F RTI L+EAG+KP Y+FDG+PPD KK+EL KR R +A + EA+E G+ E+ +K++ R +V + +D K LL+LMG+PV++APSE EAQ A + +VYA AS+D DSL Sbjct: 12 KEIELENLYGRRVAIDAFNAIYQFLSTIRQRDGTPLMDSQGRITSHLSGLFYRTINLMEAGIKPAYIFDGKPPDFKKRELEKRREAREEAEEKWYEALERGDLEEAKKYAMRATRVNEGLINDAKTLLELMGIPVIQAPSEGEAQAAYMAAKKKVYASASQDYDSL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_PYRCJ (Flap structure-specific endonuclease OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fen PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.891e-39 Identity = 81/184 (44.02%), Postives = 121/184 (65.76%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+ L KL+ +A +E K ES G+ +A+DA ++YQFL + + L + AG +TSHL G+F RTI LLEAG+KP+YVFDG+PP+ K E+ +R + A +++ +A+ G +ED+ K++KR + +T + +D K+LL MG+P V+APSE EAQ A + K G +AV S+D DSL Sbjct: 1 MGVTELGKLIGK---EARREIKLESLAGKCVALDAYNALYQFLASIRQPDGTPLMDRAGRITSHLSGLFYRTINLLEAGVKPVYVFDGKPPEFKLLEIEQRKKAKEKALEEVEKAIREGRREDVAKYAKRAIFLTSEMVEDAKKLLTYMGIPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSL 181
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_PYRAR (Flap structure-specific endonuclease OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fen PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.776e-39 Identity = 79/184 (42.93%), Postives = 122/184 (66.30%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+ L KL+ +A +E K E+ GR +A+DA ++YQFL + + L + AG +TSH+ G+F RTI L+EAG+KP+YVFDG+PP+ K E+ +R + AT++L A++ G ++++ K++KR + +T + +D K+LL MGVP V+APSE EAQ A + + G +AV S+D DSL Sbjct: 1 MGVTELGKLIGK---EARREVKLEALAGRCVALDAYNALYQFLASIRQPDGTPLMDRAGRITSHISGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRKAKEKATEELVRAIKEGRRDEVAKYAKRAIFLTNEMVEDAKKLLTYMGVPWVQAPSEGEAQAAYMARRGHCWAVGSQDYDSL 181
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_PYRIL (Flap structure-specific endonuclease OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fen PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.874e-38 Identity = 82/184 (44.57%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+ L KL+ + +E K E+ G+ IA+DA S+YQFL + + L + G +TSHL G+F RTI L+EAG+KP+YVFDG+PP+ K E+ +R + A +++ +A++ G KED+ K+ KR V +T +D K+LL MGVP V+APSE EAQ A + K G +AV S+D DSL Sbjct: 1 MGVTELGKLIGKDI---RREVKLENLAGKCIALDAYNSLYQFLASIRQPDGTPLMDRVGRITSHLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRKVKEKAMEEVLKAIKEGRKEDVAKYMKRAVFLTSDMVEDAKKLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSL 181
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_THEGJ (Flap structure-specific endonuclease OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fen PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.448e-38 Identity = 81/166 (48.80%), Postives = 111/166 (66.87%), Query Frame = 3 Query: 111 KEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 KE + E+ +G+K+AIDA ++YQFL + + L + G +TSHL G F RTI L+EAG+KP YVFDG+PP KK+EL KR R +A + EA+E G E+ +K++ R K+ + +D K+LL LMGVPVV+APSE EAQ A + +VYA AS+D DSL Sbjct: 12 KEIELENLYGKKVAIDAFNAMYQFLSTIRQRDGTPLMDSKGRITSHLSGFFYRTINLMEAGIKPAYVFDGEPPAFKKKELEKRREAREEAEEKWHEALERGEIEEAKKYAMRATKLNETLIEDAKKLLGLMGVPVVQAPSEGEAQAAYMAAKKRVYASASQDYDSL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_THENV (Flap structure-specific endonuclease OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=fen PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.197e-38 Identity = 82/184 (44.57%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+ L KL+ +A +E K E+ GR IA+DA ++YQFL + + L + G VTSHL G+F RTI L+EAG+KP+YVFDG+PP+ K E+ R + A +++ +A+ G ++D+ K+ KR + +T + +D KRLL MGVP V+APSE EAQ A + K G +AV S+D DSL Sbjct: 1 MGVTELGKLIGR---EARREIKLENLAGRCIALDAYNALYQFLASIRQPDGTPLMDRQGRVTSHLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEARRRVKEKAMEEVVKAIREGKRDDVAKYMKRVIFLTNEMVEDAKRLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSL 181 The following BLAST results are available for this feature:
BLAST of FC920893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920893 ID=FC920893; Name=FC920893; organism=Citrus clementina; type=EST; length=654bpback to top |