FC920893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_THESM (Flap structure-specific endonuclease OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fen PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.072e-37 Identity = 79/166 (47.59%), Postives = 111/166 (66.87%), Query Frame = 3 Query: 111 KEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 KE + E+ GRK+AIDA +IYQFL + + L + G +TSHL G+F RTI L+EAG+KP YVFDG+PP+ KK+EL KR R +A + A+ G E+ +K+++R K+ + +D K+LL+LMG+P V+APSE EAQ A + G V+A AS+D DSL Sbjct: 12 KELELENLNGRKVAIDAFNAIYQFLSTIRQKDGTPLMDSKGRITSHLSGLFYRTINLMEAGIKPAYVFDGKPPEFKKKELEKRAETREEALEKWEIALARGELEEAKKYAQRASKINEILIEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGDVWASASQDYDSL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_CALMQ (Flap structure-specific endonuclease OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=fen PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.908e-36 Identity = 82/183 (44.81%), Postives = 112/183 (61.20%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDS 605 MG+ L KL+ DN + + E G+ IA+DA ++YQFL + + L + G VTSHL G+ RTI LLE G+KP+YVFDG+PP+LK E+ KR R A +D +AVE G K + K+++R + +T D+ KRLL MGVP V+APSE EAQ A + G V+A S+D DS Sbjct: 1 MGVTELGKLIPDNLRRRVS---LEQLNGKLIALDAYNALYQFLASIRQPDGTPLMDSQGRVTSHLSGLLYRTINLLEYGIKPVYVFDGKPPELKLIEIEKRRRVREKAVEDWIKAVEEGKKSEARKYAQRALFITSDMVDEAKRLLDSMGVPWVQAPSEGEAQAAYMASKGIVWAAGSQDYDS 180
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_METKA (Flap structure-specific endonuclease OS=Methanopyrus kandleri GN=fen PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.370e-35 Identity = 76/184 (41.30%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+ L +L+ +E + GR+IAIDA ++YQFL + + G ++ + G +TSHL G+ RT+ L+E G+KP+YVFDG+PPDLK++ L +R ++ +A + L A KE+ EK++++ ++ + +D KRLL LMG+P V+APSE EAQCA + + G V+A S+D DSL Sbjct: 1 MGLAELRELIEP------EETDLRALAGREIAIDAFNALYQFLTTIMKDGRPLMDSR-GRITSHLNGLLYRTVNLVEEGIKPVYVFDGEPPDLKRETLERRRERKEEAMEKLR---RAKTKEEREKYARQVARLDESLVEDAKRLLDLMGIPWVQAPSEGEAQCAYMARCGDVWATGSQDYDSL 174
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_THEPD (Flap structure-specific endonuclease OS=Thermofilum pendens (strain Hrk 5) GN=fen PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.257e-34 Identity = 75/160 (46.88%), Postives = 105/160 (65.62%), Query Frame = 3 Query: 132 YFGRK-IAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 +F +K IAIDA S+YQFL + + L + G VTSHL G+F RTI +E G+KP+YVFDG+PP+LK++EL +RY + +A EA+E G+ E+ ++++T ++T D K LL+ MGVP VEAPSE EAQ A + K G +A S+D DSL Sbjct: 20 FFSKKVIAIDAYNSLYQFLATIRQKDGTPLLDAQGNVTSHLNGLFYRTINYIELGIKPVYVFDGRPPELKQKELERRYQIKVEAEKKYREAIERGDLEEARIYAQQTSRLTAAMVHDAKLLLRYMGVPYVEAPSEGEAQAAYMVKKGDAWASGSQDFDSL 179
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_IGNH4 (Flap structure-specific endonuclease OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fen PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.658e-34 Identity = 76/184 (41.30%), Postives = 112/184 (60.87%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+ L +L+ K ++ +S + +A+DA ++YQFL + L + G VTSHL G+F RTI +LE G+K YVFDG PP LK +E+ +R + +A EAV G+ E+ K+++ + K+TK+ ++ KRLL+ MGVP V+APSE EAQ A + G V+A AS+D DSL Sbjct: 1 MGVTALRELIPSKCKKTLE---LKSLSNKSVALDAYNTLYQFLAAIRGEDGRPLMDSKGRVTSHLSGLFYRTINMLENGIKVAYVFDGAPPKLKTREIERRQKLKQEAEKKYEEAVRRGDVEEARKYAQMSAKLTKEMVEEAKRLLEAMGVPWVQAPSEGEAQAAYMAAKGDVWASASQDYDSL 181
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_AERPE (Flap structure-specific endonuclease OS=Aeropyrum pernix GN=fen PE=3 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 3.096e-33 Identity = 69/170 (40.59%), Postives = 106/170 (62.35%), Query Frame = 3 Query: 99 PKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 P+A +E + + G +A+DA +YQFL + + L + G VTSHL G+F RTI L+E G+KP+YVFDG+PP++K +E+ +R ++A+A AVEAG E+ K++ ++T ++ K LL MG+P V+AP+E EAQ A + + G +A S+D DSL Sbjct: 11 PEARREVELRALSGYVLALDAYNMLYQFLTAIRQPDGTPLLDREGRVTSHLSGLFYRTINLVEEGIKPVYVFDGKPPEMKSREVEERLRRKAEAEARYRRAVEAGEVEEARKYAMMAARLTSDMVEESKELLDAMGMPWVQAPAEGEAQAAYMARKGDAWATGSQDYDSL 180
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_CENSY (Flap structure-specific endonuclease OS=Cenarchaeum symbiosum GN=fen PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.177e-32 Identity = 70/163 (42.94%), Postives = 101/163 (61.96%), Query Frame = 3 Query: 120 KFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 + ES+ + +AIDA +IYQFL + LT+ G VTSHL G+ R L G+KP+YVFDG+PP LK E+ +R + + A A AV+AGN +D K++++T + DD K++LKL G+P ++APSE EA A L ++G YA AS+D DS+ Sbjct: 15 RLESFATKVVAIDAYNAIYQFLATIRGPDGMQLTDARGRVTSHLSGLLYRNASFLSMGIKPVYVFDGRPPTLKSAEIERRRNVKKGAAVKYAAAVDAGNMDDARKYAQQTTSMRDGMVDDSKQILKLFGIPYIDAPSEGEATAAYLTQTGDAYASASQDFDSV 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_SULTO (Flap structure-specific endonuclease OS=Sulfolobus tokodaii GN=fen PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.537e-32 Identity = 74/177 (41.81%), Postives = 112/177 (63.28%), Query Frame = 3 Query: 84 LADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGN--KEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 LA+ + KE F G+KI+IDA ++YQFL + + L + G VTSHL G+F RTI +LE G+ PIYVFDG+PP+ K QEL +R + +A L +A G+ +++K+++ ++++T + ++ K LLK MG+PVV+APSE EA+ A + G +A AS+D DSL Sbjct: 3 LAELVEEIKKELSFAELKGKKISIDAYNALYQFLAAIRQPDGTPLMDSQGRVTSHLNGLFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGSIKTSELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSL 179
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_SULSO (Flap structure-specific endonuclease OS=Sulfolobus solfataricus GN=fen PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.424e-32 Identity = 69/175 (39.43%), Postives = 108/175 (61.71%), Query Frame = 3 Query: 84 LADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 LAD +E F G++++ID ++YQFL + + L + G VTSHL G+F RTI +LE G+ PIYVFDG+PP+ K +EL +R + +A L A G E++ K+S+ ++++ ++ K+LL+ MG+P+V+APSE EA+ A L K G +A AS+D D++ Sbjct: 3 LADLVKDVKRELSFSELKGKRVSIDGYNALYQFLAAIRQPDGTPLMDSQGRVTSHLSGLFYRTINILEEGVIPIYVFDGKPPEQKSEELERRRKAKEEAERKLERAKSEGKIEELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDYDAI 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_KORCO (Flap structure-specific endonuclease OS=Korarchaeum cryptofilum (strain OPF8) GN=fen PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.219e-31 Identity = 77/185 (41.62%), Postives = 115/185 (62.16%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRT-GTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+K + +L+ D E + G+KIA+DA ++YQFL V + GT ++T++ GE+TS G+F RT L+ G+ PIYVFDG+ P K + + +R R +A EA+E G+ E+ K+++ + +T +DCK +LKLMGVP+V+APSE EAQ A + G V+A AS+D DSL Sbjct: 1 MGVK-IGELIEDKV-----ELELSDIAGKKIALDAFNAMYQFLAKVRQPDGTPLMTSK-GEITSVHSGIFYRTANFLKEGIIPIYVFDGEKPSFKSRAIEERVRAREEAELKWKEALEIGDLEEARKYAQAALNITGDIVEDCKTILKLMGVPIVQAPSEGEAQAAHMAMKGDVWATASQDYDSL 178 The following BLAST results are available for this feature:
BLAST of FC920893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920893 ID=FC920893; Name=FC920893; organism=Citrus clementina; type=EST; length=654bpback to top |