FC920893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_STAMF (Flap structure-specific endonuclease OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=fen PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.457e-31 Identity = 65/157 (41.40%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 138 GRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 G+ + ID ++YQFL + + L + G +TSHL G+F RTI +LE G+KP YVFDG+PP++K +E+ KR R DA+ EA+ G+ E +++ + K+T + D K+LL MG+P ++AP+E EAQ A + G +A AS+D DSL Sbjct: 25 GKIVVIDGYNALYQFLTAIRQPDGTPLMDSQGRITSHLSGLFYRTINILENGIKPAYVFDGKPPEIKAKEIEKRRKIREDASKKYEEALRKGDIEAARRYAMMSAKLTDEMVQDAKKLLDAMGIPWIQAPAEGEAQAAYIVSKGDAWASASQDYDSL 181
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_METBU (Flap structure-specific endonuclease OS=Methanococcoides burtonii (strain DSM 6242) GN=fen PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.457e-31 Identity = 67/153 (43.79%), Postives = 99/153 (64.71%), Query Frame = 3 Query: 147 IAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDS 605 +AIDA ++YQFL ++ + L + G++TSHL G+ R L+EAG+KPI+VFDG+PPD K LAKR+ R AT +A G +E+ K+++ + KVT++ DD RLL+LMG+P V+APSE EAQ + + + G + S+D DS Sbjct: 24 VAIDAYNTLYQFLSIIRQRDGTPLKDSRGQITSHLSGILYRLTSLIEAGVKPIFVFDGKPPDFKSDTLAKRHEVRESATAKWEDAKAQGLEEEAYKYAQASSKVTREMIDDSVRLLELMGIPYVKAPSEGEAQASYMVQKGDADYIGSQDYDS 176
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_NITMS (Flap structure-specific endonuclease OS=Nitrosopumilus maritimus (strain SCM1) GN=fen PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.432e-31 Identity = 67/161 (41.61%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 126 ESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 E++ + IAIDA +IYQFL + L++ G +TSHL G+ R + L G+KP+YVFDG+PP LK E+ +R + DAT +A+ GN ED K++++T + + K+LL G+P +EAPSE EA A L +GQ YA AS+D DS+ Sbjct: 17 EAFSNKVIAIDAYNAIYQFLASIRGPDGLQLSDSEGRITSHLSGLLYRNVNFLSLGIKPVYVFDGKPPSLKTAEIERRKQIKMDATIKYEKAIADGNMEDARKYAQQTTSMKDGMVKESKQLLTYFGIPYIEAPSEGEATAAHLTNTGQAYASASQDFDSI 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_HYPBU (Flap structure-specific endonuclease OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=fen PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.101e-30 Identity = 66/170 (38.82%), Postives = 107/170 (62.94%), Query Frame = 3 Query: 99 PKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 P+A++E + +AIDA ++YQFL + + L + G +TSHL G+F RTI L+E G+K +YVFDG+PP++K E+ +R +++A EAV+ G+ + ++++ ++T + +D K+LL MGVP V+AP+E EAQ A + + G +A AS+D DSL Sbjct: 11 PEAIQEIDLAHLKYKVVAIDAYNALYQFLTAIRQPDGTPLMDSKGRITSHLSGLFYRTINLMEHGIKIVYVFDGKPPEMKYLEIERRKRVKSEAVKKYEEAVKKGDTKAARRYAQMAARLTDEMVEDAKKLLDAMGVPWVQAPAEGEAQAAFMARRGDAWAAASQDYDSL 180
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_NANEQ (Flap structure-specific endonuclease OS=Nanoarchaeum equitans GN=fen PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.879e-30 Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 111 KEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 KE +F+ FG+ IAIDA ++YQFL + + G E L + G +TSHL G+F RTI LLE G+KPIYVFDG PP K KR + EA++ GN ++ K++K K+ ++ K+LL+ MG+P V+APSE EA+ A L K G S+D DSL Sbjct: 14 KEIEFKQLFGKVIAIDAFNALYQFLFSIRQDG-EPLRDSKGRITSHLSGLFYRTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQLESKYKEALKKGNIQEAIKYAKSLGKLDSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYDSL 178
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_METJA (Flap structure-specific endonuclease OS=Methanocaldococcus jannaschii GN=fen PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.879e-30 Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 3 Query: 123 FESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 FE G+K+AID ++YQFL + L N GE+TS G+F +TI LLE + PI+VFDG+PP LK++ R + A + EA++ + E+ K++KR +T + ++CK LL LMG+P VEAPSE EAQ + + K G V+AV S+D D+L Sbjct: 16 FEDLKGKKVAIDGMNALYQFLTSIRLRDGSPLRNRKGEITSAYNGVFYKTIHLLENDITPIWVFDGEPPKLKEKTRKVRREMKEKAELKMKEAIKKEDFEEAAKYAKRVSYLTPKMVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDAL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_ARCFU (Flap structure-specific endonuclease OS=Archaeoglobus fulgidus GN=fen PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.879e-30 Identity = 65/166 (39.16%), Postives = 105/166 (63.25%), Query Frame = 3 Query: 111 KEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 +E + E + G+KIA+DA ++YQF+ ++ + L + G +TSHL G+ R ++E G++P++VFDG+PP+ KK E+ +R +RA+A + A++AG+K D +K+++ +V + D K LL MG+P V+APSE EAQ A + G V S+D DSL Sbjct: 12 EEVELEYFSGKKIAVDAFNTLYQFISIIRQPDGTPLKDSQGRITSHLSGILYRVSNMVEVGIRPVFVFDGEPPEFKKAEIEERKKRRAEAEEMWIAALQAGDK-DAKKYAQAAGRVDEYIVDSAKTLLSYMGIPFVDAPSEGEAQAAYMAAKGDVEYTGSQDYDSL 176
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_META3 (Flap structure-specific endonuclease OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fen PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.590e-29 Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 3 Query: 90 DNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 D+ PK K + +AID+ IYQFL + L N GE+TS G+F +TI LL + PI+VFDG+PP+LK + +R + A+ D A N ED++K++KR + D+CK+LLKLMG+P ++APSE EAQCA + K+G Y V S+D D+L Sbjct: 7 DSIPK--KNISITDLKNKTVAIDSMNIIYQFLSSIRLRDGAPLRNSKGEITSPYNGIFYKTIYLLNNEITPIWVFDGKPPELKLKTREERRKVKEKASKDYEIAKREENIEDMQKYAKRINYLEPNTVDNCKKLLKLMGIPYIDAPSEGEAQCAHMIKNGDAYCVVSQDYDAL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_SULAC (Flap structure-specific endonuclease OS=Sulfolobus acidocaldarius GN=fen PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.543e-29 Identity = 63/157 (40.13%), Postives = 101/157 (64.33%), Query Frame = 3 Query: 138 GRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 G+KI+IDA +IYQFL + + L + G +TSHL G+F RTI ++E+G+ PI+VFDG+PP+ K +E+ +R + +A L +A G +I K+++ V+++ + ++ K+LL MG+PVV+AP E EA+ A + +A AS+D DSL Sbjct: 21 GKKISIDAYNTIYQFLAAIRQPDGTPLIDSKGRITSHLNGLFYRTISIIESGIIPIFVFDGKPPEKKSEEIERRKRAKEEAEKKLEKAKLEGEYREIRKYAQAAVRLSNEMVEESKKLLDAMGIPVVQAPGEGEAEAAYINSIDLSWAAASQDYDSL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_METPE (Flap structure-specific endonuclease OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fen PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29 Identity = 65/153 (42.48%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 150 AIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 AID + ++YQFL ++ + L N G +TSHL G+F RT+R LE G++P+Y+FDG+PP LK++ + R R +A A+ G++E+ K ++ + +VT + K LL LMGVP V+APSE EAQ A++ SG V S+D DSL Sbjct: 26 AIDGNNALYQFLSIIRQPDGTPLMNSEGRITSHLSGVFFRTLRFLEKGIRPVYIFDGKPPALKQETIESRREVRREAGVQWEAALARGDQEEAYKQARASSRVTPEIIATSKELLTLMGVPCVQAPSEGEAQAASMAASGAVTYAVSQDYDSL 178 The following BLAST results are available for this feature:
BLAST of FC920893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920893 ID=FC920893; Name=FC920893; organism=Citrus clementina; type=EST; length=654bpback to top |