FC920893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_THEAC (Flap structure-specific endonuclease OS=Thermoplasma acidophilum GN=fen PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.012e-24 Identity = 66/165 (40.00%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 114 EQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 E + + +ID +YQ L V + L + G VTSHL G+F RTI LLE ++P+YVFDG+P LK + +++R + A +L EA+E G +ED+ ++ R +T Q DD K+LL MG+P V+APSE EAQ + + K V V S+D D L Sbjct: 13 ETSLKDQGNQTFSIDTYNILYQLLSNVRQYDGMPLMDSHGNVTSHLYGIFYRTINLLENRIRPVYVFDGKPSPLKNRTISERQMMKEKAKAELEEAIERG-EEDLRQYYSRINYITPQIVDDTKKLLDYMGIPYVDAPSEGEAQASYMTKK-NVDGVISQDYDCL 175
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_PICTO (Flap structure-specific endonuclease OS=Picrophilus torridus GN=fen PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.012e-24 Identity = 65/165 (39.39%), Postives = 90/165 (54.55%), Query Frame = 3 Query: 114 EQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 E + G +++DA IYQFL + E L + G +TSHL G+F RT LLE +KP+YVFDG+P LK + L +R + L EA+ + + I S R +T ++ K LL LMG+P V+APSE EAQ + + G V AV S+D D L Sbjct: 13 ETSLKDNSGSIVSVDAYNIIYQFLSSIRGDDGEPLKDSNGNITSHLSGIFYRTSNLLENNIKPVYVFDGKPFHLKSETLRERSLIKEKNIMKLEEAIASNDDAKIRSLSSRINYITDDIVNESKTLLNLMGLPYVQAPSEGEAQASYMTLKGDVNAVVSQDYDCL 177
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_METLZ (Flap structure-specific endonuclease OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=fen PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.304e-23 Identity = 66/184 (35.87%), Postives = 98/184 (53.26%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 MG+ L LLA+ KE G A+DA ++YQFL + + L + G +TSHL G+ R L+E + PIYVFDG+PP K L+KR R +A D +A++ G++E K++ + K+ D K LL +G+ ++AP E EAQ + + K+G V S+D DSL Sbjct: 1 MGV-ALRPLLAE-----YKESPGWDGLGGIAAVDAFNALYQFLSGIRQADGAPLMDGQGRITSHLSGLLFRNANLIEKNITPIYVFDGKPPVFKASTLSKRREVRENAADAWEKALKEGDEESARKYAMASSKIDAFIIDSSKELLSALGIAWIQAPEEGEAQSSFMTKNGDVTYAVSQDYDSL 178
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_THEVO (Flap structure-specific endonuclease OS=Thermoplasma volcanium GN=fen PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.459e-22 Identity = 62/153 (40.52%), Postives = 90/153 (58.82%), Query Frame = 3 Query: 150 AIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 AID +YQ L V + L + +G VTSHL G+F RT+ L+E G+KPI+VFDG+P LK + L R + A +L EA+ G +E+++++ R +T Q +D K LL MG+P V+APSE EAQ + + + V S+D D L Sbjct: 25 AIDTYNILYQLLSNVRQYDGTPLMDSSGNVTSHLYGIFYRTVNLVENGIKPIFVFDGKPSPLKNRTLEIRQLAKEKAKAELEEAISRG-EENLKQYYSRINYITPQIVNDTKELLTYMGIPYVDAPSEGEAQASYMTRK-DADGVISQDYDCL 175
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_METHJ (Flap structure-specific endonuclease OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=fen PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.195e-22 Identity = 51/153 (33.33%), Postives = 92/153 (60.13%), Query Frame = 3 Query: 150 AIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 AIDA ++YQFL ++ + L +++G +TSHL G+F RT L G++P+++FDG+ P++K + + +R R ++ + +A + G+ +++ + + ++L++LMG+PVV+APSE EAQ A + G V S+D D+L Sbjct: 26 AIDAFNALYQFLSIIRQPDGTPLMDDSGRITSHLSGIFFRTANFLTQGIRPVFIFDGKSPEMKGRTIQERRDVREESKEKWDQAKKEGDLAGAFRYAMSSTAIDAYILSSARQLIQLMGLPVVDAPSEGEAQGAYMVLKGDADYVVSQDYDTL 178
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_HALMA (Flap structure-specific endonuclease OS=Haloarcula marismortui GN=fen PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.762e-20 Identity = 56/169 (33.14%), Postives = 89/169 (52.66%), Query Frame = 3 Query: 105 AMKEQKFESYFGRKIAIDASMSIYQFLIVVGR-TGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 A+ + F+ G +A+DA +Y++L + T T GE ++L G+ + E M P++VFDG DLK E+ KR +R +L A EAG+ + K RT ++T D + LL+L+ VP+V+AP+E E Q + + + G V V +ED D+L Sbjct: 11 ALSDVSFDDLGGSVVAVDAHNWLYRYLTTTVKFTSESKYTTSNGEEVANLIGVVQGLPKFFEHDMTPVFVFDGAVTDLKDDEVEKRREQRQKYESELEAAREAGDSTRVAKLDSRTQRLTDTIVDTTRDLLELLDVPIVDAPAEGEGQASVMARRGDVDYVGTEDYDAL 179
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: YL386_MIMIV (Putative endonuclease L386 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L386 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.675e-18 Identity = 68/215 (31.63%), Postives = 100/215 (46.51%), Query Frame = 3 Query: 57 MGIKGLTKLLADNAPKAMKE-----------------------QKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALC----KSGQVY--AVASEDMDSLTL 614 MGIKGL KLL + + KE +F G +AIDAS++IY+ + ++G L N G++TSHL+G+F + L+ + PIYVFDG+ PD+K + + KR K K K+T + + + LL LMG+P + AP EA+ C+ LC +G+ Y V +ED D L L Sbjct: 1 MGIKGLFKLLREKIKEEEKEGLKRKELGIPDDDTKIKYKPLTVYRFRRLKGITVAIDASLAIYRMVYGKLKSGPS-LVNREGKLTSHLRGIFYNVLTFLQNDIIPIYVFDGKAPDIKSKTIEKR------------------------KLRKDRFKLTSEDIKEVQILLDLMGIPYIIAPGEADVICSWLCARHDSNGKRYVKGVCTEDSDMLPL 190
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_HALWD (Flap structure-specific endonuclease OS=Haloquadratum walsbyi (strain DSM 16790) GN=fen PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.675e-18 Identity = 54/169 (31.95%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 105 AMKEQKFESYFGRKIAIDASMSIYQFLIVVGR-TGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVASEDMDSL 608 A++ F+ G IA+DA +Y++L + T T E+G ++L G+ + E + P++VFDG +LK +E+ +R R +A + A A E G++ + RT ++T+ ++ + LL + VP++EAP+E EAQ A + G V V SED D+L Sbjct: 11 ALESVAFDDISGSVIAVDAHNWLYRYLTTTVKFTSDAAYTTESGVEVANLIGVVQGLPKFFEHDLTPVFVFDGGVTELKDEEVQERRVAREEAVELQAAAEERGDELAASRLEARTQRLTETIHETTRGLLNRLDVPIIEAPAEGEAQAAEMAIRGDVDYVGSEDYDTL 179
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_HALSA (Flap structure-specific endonuclease OS=Halobacterium salinarium GN=fen PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.111e-17 Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 105 AMKEQKFESYFGRKIAIDASMSIYQFLIV-VGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVA-SEDMDSLTL 614 A++E F G +A+DA +Y++L V TG ++ T G ++L G + E G+ P++V+DG +LK E+A R +R + L +A EAG+ + + RT ++T ++ + L L+ +P VEAP+E EAQ A + ++ A S+D D L L Sbjct: 11 AIEETPFADLEGSVVAVDAHNWLYKYLTTTVQWTGADVYTTSDGTEVANLVGAVQGLPKFFEHGLTPVFVWDGGVTELKDDEIADRREQRERYEEQLDDAREAGDAAEAARLDARTQRLTPTIHETTRELFDLLDIPQVEAPAEGEAQAAYMTRTDDAVDYAGSDDYDCLLL 182
BLAST of FC920893 vs. ExPASy Swiss-Prot
Match: FEN_HALS3 (Flap structure-specific endonuclease OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fen PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.111e-17 Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 105 AMKEQKFESYFGRKIAIDASMSIYQFLIV-VGRTGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPIYVFDGQPPDLKKQELAKRYSKRADATDDLAEAVEAGNKEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVVEAPSEAEAQCAALCKSGQVYAVA-SEDMDSLTL 614 A++E F G +A+DA +Y++L V TG ++ T G ++L G + E G+ P++V+DG +LK E+A R +R + L +A EAG+ + + RT ++T ++ + L L+ +P VEAP+E EAQ A + ++ A S+D D L L Sbjct: 11 AIEETPFADLEGSVVAVDAHNWLYKYLTTTVQWTGADVYTTSDGTEVANLVGAVQGLPKFFEHGLTPVFVWDGGVTELKDDEIADRREQRERYEEQLDDAREAGDAAEAARLDARTQRLTPTIHETTRELFDLLDIPQVEAPAEGEAQAAYMTRTDDAVDYAGSDDYDCLLL 182 The following BLAST results are available for this feature:
BLAST of FC920893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920893 ID=FC920893; Name=FC920893; organism=Citrus clementina; type=EST; length=654bpback to top |