FC920897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX3Y_PANTR (ATP-dependent RNA helicase DDX3Y OS=Pan troglodytes GN=DDX3Y PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29 Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECL--QKTPPPVLIFCENR 629 P L++ P+RELA Q YE +F R +R + GG D+ Q+ ++RG H++VATPGRL DM+ + K+ LD C+YL LDEADR++D+GFE IR + + K R T++FSAT P +IQ AR L + + + VGR G+ + ++ Q+V +V+ K +LL+ L T L+F E + Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSR------VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGAAGTDSLTLVFVETK 449
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: RH42_ARATH (DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana GN=RH42 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.351e-29 Identity = 66/177 (37.29%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 66 GEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCR---YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECL 587 G+GP L++ P+REL +Q + + +F P+ +R + GG + Q+ +KRG IVV TPGR+ D+L + N R +L +DEADR+ D+GFE I + + + +RQT+LFSAT P +++ AR L KPV + VG N D+ Q VE + + + LLE L Sbjct: 600 GDGPIGLVMAPTRELVQQIHSDIRKFSKPL------GIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELL 770 HSP 2 Score: 26.1794 bits (56), Expect = 1.351e-29 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 679 VAVHGGKDQEEREYAIS 729 +++HGGKDQ +RE IS Sbjct: 804 LSLHGGKDQTDRESTIS 820
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_EMENI (ATP-dependent RNA helicase ded1 OS=Emericella nidulans GN=ded1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.361e-29 Identity = 77/193 (39.90%), Postives = 112/193 (58.03%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKA----QRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENRLM 635 P LI+ P+REL Q ++ +F A +R + GG D+ SQL ++RG ++VATPGRL D++ + +++L N +YL LDEADR++D+GFE IR + + RQTL+FSAT P IQ AR L V ++VGR G+ + ++ Q+VEYV+ K LL+ L T LIF E + M Sbjct: 272 PTSLILAPTRELVSQIFDEARKF------AYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHGTTGLTLIFVETKRM 458 HSP 2 Score: 25.7942 bits (55), Expect = 1.361e-29 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 664 ERIEAVAVHGGKDQEEREYAI 726 +R A A+HG + Q ERE A+ Sbjct: 469 QRFPATAIHGDRTQRERERAL 489
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX23_PONAB (Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii GN=DDX23 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.767e-29 Identity = 72/214 (33.64%), Postives = 112/214 (52.34%), Query Frame = 3 Query: 69 EGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQ--------------------------RQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECL-QKTPPPVLIFCENR 629 +GP+ +I+ P+RELA+Q E +F P+ +RT+ IGG+ Q ++ G IV+ATPGRL D+L + + C Y+ LDEADR++D+GFE D++++ +H RQT++F+ATMP ++ ARS L +P V +G AG + V Q+V + + K LL L Q PP++IF + Sbjct: 467 QGPYAIILAPTRELAQQIEEETIKFGKPL------GIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVPSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQK 674 HSP 2 Score: 29.261 bits (64), Expect = 1.767e-29 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAISS 732 A +HGGK QE+RE+A+S+ Sbjct: 691 ACTLHGGKGQEQREFALSN 709
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_ASPCL (ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus GN=ded1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.772e-29 Identity = 77/193 (39.90%), Postives = 112/193 (58.03%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKA----QRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENRLM 635 P LI+ P+REL Q ++ +F A +R + GG D+ SQL ++RG ++VATPGRL D++ + +++L N YL LDEADR++D+GFE IR + + +RQTL+FSAT P IQ AR L V ++VGR G+ + ++ Q+VEYV+ K LL+ L T LIF E + M Sbjct: 277 PTSLILAPTRELVSQIFDEARKF------AYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNINYLVLDEADRMLDMGFEPQIRRIVEGEDMPSVNERQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDILHTHGTSGLTLIFVETKRM 463 HSP 2 Score: 25.7942 bits (55), Expect = 1.772e-29 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 664 ERIEAVAVHGGKDQEEREYAI 726 +R A A+HG + Q ERE A+ Sbjct: 474 QRFPATAIHGDRTQRERERAL 494
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DBP2_LODEL (ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus GN=DBP2 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.777e-29 Identity = 72/193 (37.31%), Postives = 102/193 (52.85%), Query Frame = 3 Query: 66 GEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEV-----EYVKQEAKIVYLLECLQKTPPPVLIFCENR 629 G+GP L++ P+RELA Q +F R +R GG Q+ + GV I +ATPGRL DML K NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P ++QN AR L P+ V +G A I ++ EY K++ + +L L + VL+F + Sbjct: 187 GDGPIVLVLAPTRELACQIQTECSKFGASSR------IRNTCVYGGAPKGPQIRDLANGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQNLARDYLDNPIQVTIGSLELAASHTITQIVQVVTEYQKRDLLVKHLESALADSNSKVLVFASTK 373 HSP 2 Score: 25.0238 bits (53), Expect = 1.777e-29 Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAI 726 A+A+HG K+Q ER++ + Sbjct: 390 ALAIHGDKEQHERDWVL 406
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DBP2_USTMA (ATP-dependent RNA helicase DBP2 OS=Ustilago maydis GN=DBP2 PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.013e-29 Identity = 76/200 (38.00%), Postives = 107/200 (53.50%), Query Frame = 3 Query: 63 PGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG-AANLDVIQEVEY---VKQEAKIVYLLECLQKTPPPVLIFCENRLMLTTFT 650 PG+GP LI+ P+RELA Q +F G LRT GGV Q+ ++RG I +ATPGRL DM+ K NL YL +DEADR++D+GFE IR++ + RQTL+FSAT P ++Q A L VN+G AAN +V Q +E +++ K++ LE + V+IF + + T Sbjct: 200 PGDGPIALILAPTRELANQIQVECNRF------GGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEVQRLAGDFLNNYAQVNIGSTELAANHNVKQIIEVCTEFEKKGKLIGHLETISAENGKVIIFTSTKRVADDLT 393 HSP 2 Score: 25.409 bits (54), Expect = 3.013e-29 Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAIS 729 A+A+HG K Q+ER++ ++ Sbjct: 403 ALAIHGDKQQQERDWVLA 420
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: PRP5_EMENI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans GN=prp5 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.882e-29 Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 3 Query: 69 EGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCR---YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECL 587 EGP LI+ P+RELA Q ++ + FL + +LR + GG ++ Q+ +KRG I+V TPGR+ D+LA + N R Y+ LDEADR+ D+GFE + ++ + + RQT+LFSAT P ++ AR L KP+ + VG ++ Q VE +E K V LLE L Sbjct: 613 EGPIGLIMTPTRELATQIHKDCKPFLKAL------NLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELL 782 HSP 2 Score: 23.483 bits (49), Expect = 3.882e-29 Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 679 VAVHGGKDQEEREYAI 726 +++HGGKDQ +R+ I Sbjct: 821 MSIHGGKDQIDRDSTI 836
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.902e-29 Identity = 69/175 (39.43%), Postives = 105/175 (60.00%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECL 587 P L++ P+RELA Q +E ++F R +R + GG + Q+ + RG H++VATPGRL+DM+ + K+ L+N R+L LDEADR++D+GFE IR + + QRQTL+FSAT P +IQ A L + + VGR G+ + ++ Q + +V + K YLL+ L Sbjct: 379 PLGLVLAPTRELATQIFEEAKKFAYRSR------MRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLL 547 HSP 2 Score: 21.1718 bits (43), Expect = 3.902e-29 Identity = 7/15 (46.67%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 682 AVHGGKDQEEREYAI 726 ++HG + Q+ERE A+ Sbjct: 588 SIHGDRTQKEREEAL 602
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DBP2_NEUCR (ATP-dependent RNA helicase dbp-2 OS=Neurospora crassa GN=dbp-2 PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 3.921e-29 Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 3 Query: 63 PGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK 593 PG+GP LI+ P+RELA Q + + +F R +R GGV Q+ + RGV + +ATPGRL DML K NL YL LDEADR++D+GFE IR++ + RQTL++SAT P +++N A L + VN+G AAN + Q VE V + K +++ L+K Sbjct: 202 PGDGPIVLILAPTRELAVQIQQEISKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRNLAADFLTDFIQVNIGSMDLAANHRITQIVEVVSESEKRDRMIKHLEK 373 HSP 2 Score: 23.0978 bits (48), Expect = 3.921e-29 Identity = 7/17 (41.18%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAI 726 A+++HG K Q ER++ + Sbjct: 408 ALSIHGDKQQNERDWVL 424 The following BLAST results are available for this feature:
BLAST of FC920897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920897 ID=FC920897; Name=FC920897; organism=Citrus clementina; type=EST; length=734bpback to top |