FC920902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_BURCJ (L-threonine 3-dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=tdh PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 57/168 (33.93%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L + ++ P +G DVL++++ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A + PA FK+P +S + ++ +P H N+ E +VLI G+GPIG++ Sbjct: 13 LTLTRVKRPEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIM 178
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_BURCH (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=tdh PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 57/168 (33.93%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L + ++ P +G DVL++++ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A + PA FK+P +S + ++ +P H N+ E +VLI G+GPIG++ Sbjct: 13 LTLTRVKRPEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIM 178
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_BURCC (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=tdh PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 57/168 (33.93%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L + ++ P +G DVL++++ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A + PA FK+P +S + ++ +P H N+ E +VLI G+GPIG++ Sbjct: 13 LTLTRVKRPEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIM 178
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_BURCA (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=tdh PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 57/168 (33.93%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L + ++ P +G DVL++++ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A + PA FK+P +S + ++ +P H N+ E +VLI G+GPIG++ Sbjct: 13 LTLTRVKRPEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIM 178
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: YJMD_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjmD OS=Bacillus subtilis GN=yjmD PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.837e-21 Identity = 61/156 (39.10%), Postives = 84/156 (53.85%), Query Frame = 1 Query: 157 DVLVRMKAVGVCGSDVHFLK-TLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVH--GCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGL 615 +VLV++K VG+CGSD+H T LA P VIGHE G +E VG+ V++L PGD V +EP C C C+ GR N+C + G VH G + +V P + ++ EE M EP ++G A R + VLI G+GPIG+ Sbjct: 27 EVLVKVKRVGICGSDMHIYHGTNPLATL----PRVIGHEVTGQVEAVGANVQSLKPGDHVVIEPISYCGSCYACRKGRPNVCAKLSVFG---VHEDGGMREYIVLPERQLHAVSKDLPWEEAVMAEPYTIGAQAVWRGQVEKGDTVLIQGAGPIGI 175
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_SOLUE (L-threonine 3-dehydrogenase OS=Solibacter usitatus (strain Ellin6076) GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21 Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L ++ + P++G DVL+R+ G+CG+DVH K A + PM IGHE G IE VGS V PGD V+ E + C +C C GR +LC ++ G+G + P G A + P ++ + + L+ A+ +P VH + E +VLI G+GPIG++ Sbjct: 13 LWLEEIPEPAIGINDVLIRVLRTGICGTDVHIYKWDEWARETIHVPMAIGHEFVGRIEAVGSNVADFFPGDIVSGEGHVVCGRCRNCFAGRRHLCAKTMGVGVNRP--GAFAEYIALPMTNIWRHHEGIDLDVAAIFDPFGNAVHTALSFPVLGE-DVLITGAGPIGIM 178
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_SHEFN (L-threonine 3-dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21 Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 139 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 P +G D+L++++ +CG+DVH + + PM+ GHE G + VG EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+P ++ + A+ +P VH ++ E +VLI G+GPIG++ Sbjct: 21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMIAGHEYVGEVVDVGQEVRGFSIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-DGAFAEYLVLPAFNAFKIPADIPDDLAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIM 178
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_RHISN (L-threonine 3-dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21 Identity = 62/169 (36.69%), Postives = 94/169 (55.62%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L ++ + +P +GP DVL+R+K +CG+DVH + A + PMV+GHE G I +VGS V G+RV+ E I C +C C+ GR +LC + G+G + P G A V P +PD+V E A+ +P VH ++ E +VL+ G+GPIG++ Sbjct: 17 LWMERVPVPEVGPNDVLIRVKKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFMGEIAEVGSAVTKHHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFAEFVCLPEYNVVTIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIM 182
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_PYRFU (Probable L-threonine 3-dehydrogenase OS=Pyrococcus furiosus GN=tdh PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21 Identity = 56/163 (34.36%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 130 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 +++P GP +VL+++ A +CG+D+H + A ++ P ++GHE AG + +VG V+ + GD V++E I C +C CK G+Y++C +K G G A V PA +K P N+ E + EPL V I + +VLI G+GP+GL+ Sbjct: 22 VDVPKPGPGEVLIKILATSICGTDLHIYEWNEWAQTRIRPPQIMGHEVAGEVVEVGPGVEGIEVGDYVSVETHIVCGKCYACKRGQYHVCQNTKIFG-VDTDGVFAEYAVVPAQNVWKNPKNIPPEYATLQEPLGNAVDTVLAGPIAGK-SVLITGAGPLGLL 182
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_RHILW (L-threonine 3-dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=tdh PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.319e-21 Identity = 58/169 (34.32%), Postives = 95/169 (56.21%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L ++ + +P +GP DVL+R++ +CG+DVH + A + PMV+GHE +G I ++GS V G+RV+ E I C +C C+ GR +LC + G+G + P G V P +P+++S E A+ +P VH ++ E +VL+ G+GPIG++ Sbjct: 17 LWMENVPVPEVGPNDVLIRVRKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFSGEIAEIGSAVTRYHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFGEFVCIPESNVVAIPEDISDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIM 182 The following BLAST results are available for this feature:
BLAST of FC920902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920902 ID=FC920902; Name=FC920902; organism=Citrus clementina; type=EST; length=669bpback to top |