FC920902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_COXB2 (L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain CbuG_Q212) GN=tdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.408e-20 Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 139 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVT 621 P G +VL+++K +CG+D+H K A + PM +GHE G I +VG L GDRV+ E I+C C C+ G+ +LC + G+G + P G A +V PA +K+P +S + A+ +P H+ ++ E +VLI G+GP+GL++ Sbjct: 21 PKPGRDEVLIKIKKTAICGTDLHIYKWDEWAQKTIPVPMHVGHEFVGEIVEVGEAASALAVGDRVSGEGHITCGDCRNCRAGKRHLCRYTVGVGVNRP--GAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGE-DVLITGAGPVGLMS 179
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_RHIME (L-threonine 3-dehydrogenase OS=Rhizobium meliloti GN=tdh PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.839e-20 Identity = 59/169 (34.91%), Postives = 94/169 (55.62%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L ++ + +P +GP DVL+R++ +CG+DVH + A+ + PMV+GHE G + +VG V G+RV+ E I C +C C+ GR +LC + G+G + P G A V P +PD+V E A+ +P VH ++ E +VL+ G+GPIG++ Sbjct: 17 LWMERVPVPEIGPNDVLIRVRKSAICGTDVHIWNWDQWAEKTIPVPMVVGHEFMGEVVEVGPAVSKHHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFAEFVCLPEYNVVSIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIM 182
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_PSYIN (L-threonine 3-dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=tdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.839e-20 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 130 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 ++ P G D+L+++ +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+P +S + ++ +P VH+ ++ E +VLI G+GPIG++ Sbjct: 20 VDKPEPGHNDLLIKIHKTAICGTDIHIYNWDEWSQNTIPVPMVVGHEYVGEVVGMGQEVRGFSVGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRT-GAFAEYLVIPAFNAFKIPAGISDDLASIFDPFGNAVHSALSFDVVGE-DVLITGAGPIGIM 180
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_PYRHO (Probable L-threonine 3-dehydrogenase OS=Pyrococcus horikoshii GN=tdh PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.401e-20 Identity = 54/163 (33.13%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 130 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 +++P GP +VL+++ A +CG+D+H + A +K P ++GHE AG + ++G V+ + GD V++E I C +C C+ G+Y++C +K G G A V PA +K P ++ E + EPL V I + +VLI G+GP+GL+ Sbjct: 22 VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG-VDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGK-SVLITGAGPLGLL 182
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_PYRAB (Probable L-threonine 3-dehydrogenase OS=Pyrococcus abyssi GN=tdh PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.401e-20 Identity = 55/163 (33.74%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 130 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 +++P GP +VL+++ A +CG+D+H + A +K P ++GHE AG + +VG V+ + GD V++E I C +C C+ G+Y++C +K G G A V PA +K P ++ E + EPL V I + +VLI G+GP+GL+ Sbjct: 22 VDVPKPGPGEVLIKVIATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG-VDTDGVFAEYAVVPAQNVWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGK-SVLITGAGPLGLL 182
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: RSPB_ECOLI (Starvation-sensing protein rspB OS=Escherichia coli (strain K12) GN=rspB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.401e-20 Identity = 62/171 (36.26%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 109 NTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVH--GCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGL 615 N L I E+P+ +V V++K G+CGSD H R + K P VIGHE GVI+ VG V++ G+RVA++P +SC C C G+ N+C LG VH G + V PA +K+P+ V+ + M EP ++ + VL+ G+GPIGL Sbjct: 10 NQLAIVEREIPTPSAGEVRVKVKLAGICGSDSHIY---RGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGL 174
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_SINMW (L-threonine 3-dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=tdh PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20 Identity = 60/169 (35.50%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 L ++ + +P +GP DVL+R++ +CG+DVH + A + PMV+GHE G I +VG V G+RV+ E I C +C C+ GR +LC + G+G + P G A V P +PD+V E A+ +P VH ++ E +VL+ G+GPIG++ Sbjct: 17 LWMERVPVPEVGPNDVLIRVRKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFMGEIVEVGPAVTKHHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFAEFVCLPEYNVVSIPDDVPDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIM 182
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_THEON (Probable L-threonine 3-dehydrogenase OS=Thermococcus onnurineus (strain NA1) GN=tdh PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.349e-20 Identity = 54/163 (33.13%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 130 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 +++P GP +VL+++ A +CG+D+H + A +K P ++GHE AG + +VG V T+ GD ++ E I C +C CK RY++C +K G + G A + PA +K P ++ E + EPL V I + LI G+GP+GL+ Sbjct: 22 VDIPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVIEVGPGVDTINVGDYISAETHIVCGKCYACKHNRYHVCQNTKIFG-VDMDGVFAEYAIVPAQNAWKNPKDMPPEYATLQEPLGNAVDTVLAGPIAGR-STLITGAGPLGLL 182
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_RHILO (L-threonine 3-dehydrogenase OS=Rhizobium loti GN=tdh PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.987e-20 Identity = 56/167 (33.53%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 121 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 ++ + +P +GP DVL++++ +CG+DVH + A V PMV GHE G + G+ V G RV+ E I C C C+ GR +LC + G+G + P G + P +PD+V E A+ +PL VH ++ E +VL+ G+GPIG++ Sbjct: 19 MEEVPVPEIGPNDVLIKIRKTAICGTDVHIYNWDQWAQKTVPVPMVTGHEFVGTVADFGAAVTEYKVGQRVSGEGHIVCGHCRNCRAGRGHLCRNTLGVGVNRP--GAFGEYLAIPQHNVVPIPDDVPDEIAAIFDPLGNAVHTALSFDLVGE-DVLVTGAGPIGIM 182
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_STRAW (L-threonine 3-dehydrogenase OS=Streptomyces avermitilis GN=tdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.125e-20 Identity = 62/182 (34.07%), Postives = 91/182 (50.00%), Query Frame = 1 Query: 73 EEVNMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618 E+ WLM V P +GP DVL+++ G+CG+D+H A V+ P+V+GHE G + + G +V + GDRV+ E + C +C C+ GR +LC + GLG G A V PA + V L+ A+ +P VH + E +VLI G+GPIGL+ Sbjct: 7 EKAEPGLWLMDVPE--------PEIGPGDVLIKVLRTGICGTDLHIRSWDGWAQQAVRTPLVLGHEFVGEVVETGRDVVDIKAGDRVSGEGHLVCGKCRNCQAGRRHLCRATVGLGVGR-DGAFAEYVALPAANVWVHRVPVDLDVAAIFDPFGNAVHTALSFPLVGE-DVLITGAGPIGLM 178 The following BLAST results are available for this feature:
BLAST of FC920902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920902 ID=FC920902; Name=FC920902; organism=Citrus clementina; type=EST; length=669bpback to top |