FC920902

Overview
NameFC920902
Unique NameFC920902
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.007e-18
Identity = 66/173 (38.15%), Postives = 89/173 (51.45%), Query Frame = 1
Query:  115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGSGPIGLV 618
            LKI+ +E P++   +VLVR+KA GVC +D+H        D+ VK   P++ GHE  G++E+VG  V  L  GDRV + P +  +C  CDYC  G+  LC   K  G   V G  A      AD   K+PDN+S EE A      V  + A +     P   V I G G +G V
Sbjct:   13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHV 179          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: DHSO_PIG (Sorbitol dehydrogenase (Fragment) OS=Sus scrofa GN=SORD PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 8.541e-18
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1
Query:   82 NMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 348
            N++  + G   L+++   +P  GP  VL++M +VG+CGSDVH+ +  R+ +FVVK+PMV+GHE +G   KVGS V  L PGDR A EPG
Sbjct:    8 NLSLVVHGPGDLRLENYPIPEPGPNXVLLKMHSVGICGSDVHYWQHGRIGNFVVKKPMVLGHEASGTXVKVGSLVTHLKPGDRXAXEPG 96          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: TDH_PROAC (L-threonine 3-dehydrogenase OS=Propionibacterium acnes GN=tdh PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17
Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 1
Query:  139 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCF--KLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTC*ELVLXSS*NVIV 663
            P  GP DV+V++   G+CG+DVH  K    A   V  P+V+GHE  G I ++GSEV  L  G  V+ E    C +C  C  G+ +LC  ++G+G   V+G      V PA   +   +PD +  +  A+ +P    VH   +     E +VL+ G+GPIG++         + NV+V
Sbjct:   21 PVAGPNDVIVKVMRTGICGTDVHIDKWDGWAAKTVHTPLVLGHEFCGEIVELGSEVNDLEVGQFVSGEGHYVCGRCRACLAGKRHLCRNTQGIGY-AVNGAYCQYFVMPAGNVWVHHIPD-LDPDVAAIFDPFGNAVHTALQFPCLAE-DVLVSGAGPIGIMAALVAQFQGARNVVV 194          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: IDND_ECOLI (L-idonate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnD PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 51/154 (33.12%), Postives = 74/154 (48.05%), Query Frame = 1
Query:  163 LVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGS----PPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIG 612
            LV++   G+CGSD+H+ +  ++ +F++K PMV+GHE  G +  + S+   L  G  VA+ P   C  C YC     N C + +  GS    P V G      +     C   P     +  A  EPL+V +HA  +A       V I G GPIG
Sbjct:   31 LVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKV--IHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTDMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIG 182          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: BDH2_YEAST (Probable (R,R)-butanediol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=BDH2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 60/182 (32.97%), Postives = 89/182 (48.90%), Query Frame = 1
Query:  145 LGPYDVLVRMKAVGVCGSDVHFLKTLRL---ADFVVKE------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC-----WQ---------CDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVT 621
            + P ++++ ++  G+CG+D+H      +    D    E      P  +GHE AG + +VG  VK L  GD+V +EP  +C     W          C  CK G YN+C      G+    G  A +VV     C+K+PD V L+  A+ +PL+V  HA R       +  LI+G+GPIGL T
Sbjct:   24 VAPDELVIDIEWCGICGTDLHEYTDGPIFFPEDGHTHEISHNPLPQAMGHEMAGTVLEVGPGVKNLKVGDKVVVEPTGTCRDRYRWPLSPNVDKEWCAACKKGYYNICSYLGLCGAGVQSGGFAERVVMNESHCYKVPDFVPLDVAALIQPLAVCWHAIRVCEFKAGSTALIIGAGPIGLGT 205          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: BDH1_YEAST ((R,R)-butanediol dehydrogenase OS=Saccharomyces cerevisiae GN=BDH1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 56/180 (31.11%), Postives = 89/180 (49.44%), Query Frame = 1
Query:  157 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKE-----------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC-----WQ---------CDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVT 621
            +V++ +   G+CGSD+H  + L    F+ K+           P+ +GHE +G++ KVG +V  +  GD V ++   SC     W          CD C+ G  NLC  +  +G   + G  A QVV        +P  + L+  A+ EPLSV  HA + +     ++ L++G+GPIGL T
Sbjct:   28 EVIIDVSWCGICGSDLH--EYLDGPIFMPKDGECHKLSNAALPLAMGHEMSGIVSKVGPKVTKVKVGDHVVVDAASSCADLHCWPHSKFYNSKPCDACQRGSENLCTHAGFVGLGVISGGFAEQVVVSQHHIIPVPKEIPLDVAALVEPLSVTWHAVKISGFKKGSSALVLGAGPIGLCT 205          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 65/173 (37.57%), Postives = 88/173 (50.87%), Query Frame = 1
Query:  115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGSGPIGLV 618
            L+++ +E P +   +VLVR+KA GVC +D+H        D+ VK   P++ GHE  GVIE+VG  V  L  GDRV + P +  +C  CDYC  G+  LC   +  G   V G  A      AD   K+PDN+S EE A      V  + A +     P   V I G G +G V
Sbjct:   13 LQVKEVEKPKISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCERQQNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHV 179          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: BDHA_BACSU ((R,R)-butanediol dehydrogenase OS=Bacillus subtilis GN=bdhA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.230e-17
Identity = 57/178 (32.02%), Postives = 91/178 (51.12%), Query Frame = 1
Query:  115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKE----------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618
            ++I+ +E P   P  V +++K  G+CGSD+H  + L    F+  +          P+ +GHE +G + +VG  V+    GDRV +EP  +     +   G YNL  +   LG     G  +  V    +L FKLPD +S E+GA+ EP +V ++A R + +       + G GPIGL+
Sbjct:   12 IRIEHIEEPKTEPGKVKIKVKWCGICGSDLH--EYLGGPIFIPVDKPHPLTNETAPVTMGHEFSGEVVEVGEGVENYKVGDRVVVEPIFAT----HGHQGAYNLDEQMGFLGLAGGGGGFSEYVSVDEELLFKLPDELSYEQGALVEPSAVALYAVRSSKLKAGDKAAVFGCGPIGLL 183          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: YHG1_SCHPO (Zinc-type alcohol dehydrogenase-like protein C1198.01 OS=Schizosaccharomyces pombe GN=SPBC1198.01 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15
Identity = 69/225 (30.67%), Postives = 101/225 (44.89%), Query Frame = 1
Query:   31 MGKGGMSQGE---KEDGEEVNMAAWLM-GVNTLKIQPLELPSLG-PYDVLVRMKAVGVC-GSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---------------------SKGLGSPPVHGCLANQVVHP-ADL-CFKLPDNVSLEEGA-MCEPLSVGVHACRRANIGPETNVLIMGSGPIGL 615
            +G   +S+G    K D     M A +  G   +KI  +  P++  P DV+V+  A  +C GSD H           +++  ++GHE  G++ + G EV  L  GDRV +   ++C QC +CK   Y  C                       +K LG  P  GC A  +  P A++ C KLPD++   EG  M + L   +HAC    +     V I G GPIGL
Sbjct:   16 LGHREVSEGSTQPKPDPSGATMKACVWDGPLNVKIAEVPKPTITHPKDVIVKTTACTICSGSDSHIFSGEMPG---IEKGAILGHESCGIVAEKGDEVNNLEIGDRVVIAFDLACGQCSFCKRHEYAACDTTNDSKLMDVNYGSHHSAIFGYTKLLGDVP--GCQAEYIRVPFAEINCCKLPDDIPDSEGLFMSDVLCTSLHACTLGEVKKGDTVAIWGMGPIGL 235          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH_SULTO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus tokodaii GN=adh PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 56/169 (33.14%), Postives = 86/169 (50.89%), Query Frame = 1
Query:  115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK----TLRLA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSG 603
            LK++ + +P      VL++++A GVC SDVH  +     LR+  D  VK P+ +GHE AG IE+VG EV     GD VA+ P      C YC+ G  +LC   + LG     G  A  V+ P     +KL    ++E   +         A R+A++ P   ++++G+G
Sbjct:   13 LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAG 180          
The following BLAST results are available for this feature:
BLAST of FC920902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
ADH3_BACST5.007e-1838.15Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
DHSO_PIG8.541e-1848.31Sorbitol dehydrogenase (Fragment) OS=Sus scrofa GN... [more]
TDH_PROAC1.457e-1733.90L-threonine 3-dehydrogenase OS=Propionibacterium a... [more]
IDND_ECOLI2.485e-1733.12L-idonate 5-dehydrogenase OS=Escherichia coli (str... [more]
BDH2_YEAST2.485e-1732.97Probable (R,R)-butanediol dehydrogenase 2 OS=Sacch... [more]
BDH1_YEAST2.485e-1731.11(R,R)-butanediol dehydrogenase OS=Saccharomyces ce... [more]
ADH1_BACST4.239e-1737.57Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
BDHA_BACSU7.230e-1732.02(R,R)-butanediol dehydrogenase OS=Bacillus subtili... [more]
YHG1_SCHPO1.781e-1530.67Zinc-type alcohol dehydrogenase-like protein C1198... [more]
ADH_SULTO6.767e-1533.14NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]

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Properties
Property NameValue
Genbank descriptionC32014E11EF RVDevelop1 Citrus clementina cDNA clone C32014E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920902 ID=FC920902; Name=FC920902; organism=Citrus clementina; type=EST; length=669bp
ACTTGTGTTTTTTCAGAGTGAAAAGCAAATATGGGCAAGGGAGGGATGTC
ACAAGGAGAAAAGGAAGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTA
TGGGTGTCAACACCCTCAAGATTCAGCCTTTGGAGCTTCCTTCTCTGGGA
CCTTATGATGTTTTAGTCAGGATGAAAGCCGTTGGTGTTTGTGGAAGTGA
TGTGCATTTTCTCAAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGC
CTATGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGC
GAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGAT
CAGCTGCTGGCAATGTGATTACTGCAAAGGAGGTCGATACAATTTGTGTC
CAGAGTCGAAAGGTCTTGGAAGTCCGCCAGTTCATGGTTGTCTGGCTAAT
CAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCCGACAATGTCAG
CCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCCT
GCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGATCA
GGGCCCATAGGACTTGTCACATGCTAGGAGCTCGTGCTTTTNAGCTCCTA
GAATGTCATTGTGGATGTG
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