FC920902

Overview
NameFC920902
Unique NameFC920902
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: DOIAD_STRRI (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces ribosidificus GN=rbmC PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 49/162 (30.25%), Postives = 74/162 (45.68%), Query Frame = 1
Query:  133 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618
            ++P   P + LVR+    VCGSD+ F K +         P+V GHE +G +  V   +   + G  V  +  +SC  C +C      LC +   LG      C A  +  P     +LPD + L      EPL+V ++A  R  +     V +MG+G IGL+
Sbjct:   18 DIPDPAPGEALVRIAYNSVCGSDLSFYKGVWHGSTY---PVVPGHEWSGTVVDVNGPLGAELIGTNVVGDLTVSCGTCAHCTARTPTLCEDLGELGFTRDGAC-AEYMTIPVGNLRRLPDTLPLRAACQVEPLAVALNAVDRLGVTAGEKVAVMGAGGIGLL 175          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH_SULAC (NAD-dependent alcohol dehydrogenase OS=Sulfolobus acidocaldarius GN=adh PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 52/168 (30.95%), Postives = 84/168 (50.00%), Query Frame = 1
Query:  115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTL---RLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPD-NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSG 603
            L+++ +++P +G   VLV++   GVC +D+         R++      P+VIGHE AG + ++G  V+     D+V ++P I    C YCK G    C   K LG   V+G     V+ P     FKL + + S      C  ++    A R AN+ P  +V+I+G+G
Sbjct:   13 LRLEDMDVPKVGVGQVLVKVDYAGVCHTDLSVRSGAIFNRISSSKPTLPLVIGHEIAGEVVELGGNVEGFKKSDKVLIDPWIGDGSCHYCKIGEDQYCDNPKWLGI-NVNGGYGEYVLVPDYRYMFKLRNLSTSTASPLACSGVT-AYRALRLANLDPSKSVMIIGAG 178          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 50/171 (29.24%), Postives = 81/171 (47.37%), Query Frame = 1
Query:  130 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPE-------SKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIG 612
            +E   L P+DVL+ +K  G+C SD+H              PMV GHE AGV+  VG++V  L  GDRV +   + SC +C+YC       C +       S      P +G  + ++V       ++PD + ++  +  +C  ++      +  N+GP   V I+G G +G
Sbjct:   24 IERRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIF---PMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITT-YSPLKHWNVGPGKKVAIVGVGGLG 190          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH_CLOBE (NADP-dependent alcohol dehydrogenase OS=Clostridium beijerinckii GN=adh PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12
Identity = 56/182 (30.77%), Postives = 89/182 (48.90%), Query Frame = 1
Query:   97 LMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQV------VHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618
            ++G+N L     E P  G YD +VR  AV  C SD+H +    L D   ++ M++GHE  G + +VGSEVK   PGDRV +      W+    + G       S G+ +        + V      V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL+
Sbjct:    6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAG---FQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLM 181          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12
Identity = 56/167 (33.53%), Postives = 83/167 (49.70%), Query Frame = 1
Query:  115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLAD--FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGS 600
            L+ + + +P   P ++LV +K  GVC SD+H        D  F +K P++ GHE AGV+ K+GS VK    GD   ++    +C  C+YC+ G  + CP   G G     G         A     +P NV+L E A  +C  ++V   A +RAN+ P   V I G+
Sbjct:   22 LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWH----GDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFTH-DGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITV-YKALKRANVIPGQWVTISGA 182          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12
Identity = 56/167 (33.53%), Postives = 83/167 (49.70%), Query Frame = 1
Query:  115 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLAD--FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGS 600
            L+ + + +P   P ++LV +K  GVC SD+H        D  F +K P++ GHE AGV+ K+GS VK    GD   ++    +C  C+YC+ G  + CP   G G     G         A     +P NV+L E A  +C  ++V   A +RAN+ P   V I G+
Sbjct:   22 LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWH----GDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFTH-DGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITV-YKALKRANVIPGQWVTISGA 182          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12
Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 1
Query:  130 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADF--VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSG 603
            + +P  GP ++LV+++  GVC +D+H LK     D+   VK P+V GHE AGV+   G  V     GD   L+    SC  C++CK     LCP +  L    V G      +  A    KLP NV L+  A  +C  ++V     + + + P   V I+G+G
Sbjct:   24 IPVPKPGPDEILVKVRYSGVCHTDLHALK----GDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNA-SLSGYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITV-YKGLKESGVRPGQTVAIVGAG 180          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: YDJL_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjL OS=Escherichia coli (strain K12) GN=ydjL PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12
Identity = 50/186 (26.88%), Postives = 92/186 (49.46%), Query Frame = 1
Query:  139 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPE--SKGLGSPPVHGCLANQVVHPADL-------CFKLPDNVSLEEGAMCEPLSVGVHA-CRRANIGPETNVLIMGSGPIGLVTC*ELVLXSS*NVIV 663
            P  GP DV++ +KA  +CG+D+        +D   +   + GHE AG I +VG +VK    G RV  +  G  C  C  C+ G +  C E  + GL +    G  +   + P ++        +++PD V  E+ A+ +P+     +  +++   P  +V+++G+GP+GL +     +  + N++V
Sbjct:   22 PMCGPEDVVIEIKAAAICGADMKHYNVDSGSD---EFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVV 204          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADH_THEBR (NADP-dependent alcohol dehydrogenase OS=Thermoanaerobacter brockii GN=adh PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12
Identity = 52/170 (30.59%), Postives = 83/170 (48.82%), Query Frame = 1
Query:  133 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQV------VHPADL-CFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGSGPIGLV 618
            E P+ GP+D +VR  AV  C SD+H +    + +   +  M++GHE  G + +VGSEVK   PGDRV +      W+    + G +     S G+ +      + + V      V+ AD+    LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+
Sbjct:   18 EKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQ---HSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLM 181          
BLAST of FC920902 vs. ExPASy Swiss-Prot
Match: ADHB_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein adhB OS=Bacillus subtilis GN=adhB PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12
Identity = 48/173 (27.75%), Postives = 84/173 (48.55%), Query Frame = 1
Query:  157 DVLVRMKAVGVCGSDVHFLKTLRLADFV--VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQV-VHPADLC------------FKLPDNVSLEE-----GAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGL 615
            D+++++ +  +CGSD+H +       F+  ++E  VIGHE  G++E+VGS V  L  GDRV +   I+C +C +CK    + C +S   G    +   + Q   +P                FK+P+  S EE       + + ++ G  +   A +     V+++G GP+GL
Sbjct:   27 DMIIKVTSTAICGSDLHLIH-----GFIPNMQEDYVIGHEPMGIVEEVGSGVTKLKKGDRVIIPFNIACGECFFCKNQLESQCDQSNDNGEMGAYFGYSGQTGGYPGGQAEYLRVPFANFTHFKIPE--SCEEPDEKLSVIADAMTTGFWSVDNAGVKKGDTVIVLGCGPVGL 192          
The following BLAST results are available for this feature:
BLAST of FC920902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
DOIAD_STRRI6.334e-1330.252-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADH_SULAC6.334e-1330.95NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADHA_BACSU6.334e-1329.24Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
ADH_CLOBE1.080e-1230.77NADP-dependent alcohol dehydrogenase OS=Clostridiu... [more]
ADH5_YEAST1.843e-1233.53Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS1.843e-1233.53Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH1_ASPFN1.843e-1233.13Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
YDJL_ECOLI2.407e-1226.88Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH_THEBR2.407e-1230.59NADP-dependent alcohol dehydrogenase OS=Thermoanae... [more]
ADHB_BACSU2.407e-1227.75Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionC32014E11EF RVDevelop1 Citrus clementina cDNA clone C32014E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920902 ID=FC920902; Name=FC920902; organism=Citrus clementina; type=EST; length=669bp
ACTTGTGTTTTTTCAGAGTGAAAAGCAAATATGGGCAAGGGAGGGATGTC
ACAAGGAGAAAAGGAAGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTA
TGGGTGTCAACACCCTCAAGATTCAGCCTTTGGAGCTTCCTTCTCTGGGA
CCTTATGATGTTTTAGTCAGGATGAAAGCCGTTGGTGTTTGTGGAAGTGA
TGTGCATTTTCTCAAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGC
CTATGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGC
GAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGAT
CAGCTGCTGGCAATGTGATTACTGCAAAGGAGGTCGATACAATTTGTGTC
CAGAGTCGAAAGGTCTTGGAAGTCCGCCAGTTCATGGTTGTCTGGCTAAT
CAGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCCGACAATGTCAG
CCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCCT
GCCGCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGATCA
GGGCCCATAGGACTTGTCACATGCTAGGAGCTCGTGCTTTTNAGCTCCTA
GAATGTCATTGTGGATGTG
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