FC920904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.023e-56 Identity = 98/165 (59.39%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 ++GQAG Q+ NSCWELYCLEHGIQPDG + + F+TFFSETG+G+HVPRA++ DLEP+V+DEVRTG+YR LFHPE +I+GKEDA+NN+ARGHYTVG+E++D LD++R++ADNC GLQGFLVF + VDYGKKSKL F +Y Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAQDPDQGFSTFFSETGNGKHVPRAIYCDLEPNVVDEVRTGAYRNLFHPEMMITGKEDASNNYARGHYTVGKELIDGVLDKIRRVADNCAGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVY 172
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.450e-56 Identity = 99/165 (60.00%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 ++GQAG Q+ NSCWELYCLEHGIQPDG + + F+TFFSETG+G++VPR ++ DLEP+VIDEVRTG+YR LFHPE +ISGKEDA+NN+ARGHYTVG+E++D LD+VR++ADNC+GLQGFLVF + VDYGKKSKL F +Y Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVY 172
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 3.450e-56 Identity = 99/165 (60.00%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 ++GQAG Q+ NSCWELYCLEHGIQPDG + + F+TFFSETG+G++VPR ++ DLEP+VIDEVRTG+YR LFHPE +ISGKEDA+NN+ARGHYTVG+E++D LD+VR++ADNC+GLQGFLVF + VDYGKKSKL F +Y Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVY 172
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA_PICAB (Tubulin alpha chain (Fragment) OS=Picea abies GN=TUBA PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 5.885e-56 Identity = 102/113 (90.27%), Postives = 107/113 (94.69%), Query Frame = 2 Query: 203 CWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGL 541 CWELY LEHGIQPDG MPSDT+VG DAFNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVG EIVDLCLDRVRKLADNCTGL Sbjct: 1 CWELYWLEHGIQPDGMMPSDTTVGVGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGEEIVDLCLDRVRKLADNCTGL 113
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 5.885e-56 Identity = 98/165 (59.39%), Postives = 127/165 (76.97%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 H+GQAG Q+GN+CWELYCLEHGIQP+G M +T+ F+TFFSETG G++VPR+++VDLEP+VID+VRTG YR LFHPEQLI+GKEDA+NN+ARGHYTVG+E+VD D++R++ADNC+GLQGFLVF + ++Y KKSKL F++Y Sbjct: 8 HVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVY 172
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.004e-55 Identity = 97/165 (58.79%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 ++GQAG Q+ NSCWELYCLEHGIQPDG + + D F+TFFSETG+G++VPR ++ DLEP+V+DEVRTG+YR LFHPE +I+GKEDA+NN+ARGHYTVG+E++D LD+VR +ADNC+GLQGFLVF + VDYGKK KL F +Y Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAAEDDDGFSTFFSETGNGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPELMITGKEDASNNYARGHYTVGKELIDQVLDKVRHVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKCKLEFCVY 172
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.815e-55 Identity = 103/171 (60.23%), Postives = 130/171 (76.02%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSD----TSVGACHDAFNTFFSETGSGQHV-PRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDY-GKKSKLGFTIY 661 HIGQAG+QVGNSCWELYCLEHGI+ DG++P+D + V + TFFSE+ +G+ V PRA+F+DLEP+VIDE+RTG Y+ LFHPEQLI+GKEDAANN+ARGHYTVG+E++D+C+DR+R+LAD C GLQGFLVF +V +DY GKKSKL F +Y Sbjct: 9 HIGQAGVQVGNSCWELYCLEHGIERDGSIPADRKQSSDVNNLNKDLGTFFSESTNGKKVVPRAIFLDLEPTVIDEIRTGDYKNLFHPEQLITGKEDAANNYARGHYTVGKELIDVCVDRIRRLADQCDGLQGFLVFHSVGGGTGSGFGSLLLQKLALDYGGKKSKLDFCVY 179
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.815e-55 Identity = 101/165 (61.21%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 HIGQAG+Q+GN+CWEL+CLEH IQPDGT S D+F TFF ET ++VPRA+ VDLEP+V+DEVRTG+YR LFHPEQLI+GKEDAANN+ARGHYTVG++ VD+ DR+RKLAD+C+GLQGFL+F + V+YGKKSKL F IY Sbjct: 8 HIGQAGVQIGNACWELFCLEHSIQPDGTFSDPPS---SDDSFATFFRETSMSKYVPRAIMVDLEPTVVDEVRTGTYRHLFHPEQLITGKEDAANNYARGHYTVGKDKVDMVSDRIRKLADSCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVEYGKKSKLEFAIY 169
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 4.982e-55 Identity = 97/165 (58.79%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 ++GQAG Q+ NSCWELYCLEHGIQPDG + + F+TFFSETG G++VPR ++ DLEP+V+DEVRTG+YR LFHPE LI+GKEDA+NN+ARGHYTVG+E++D LD+VR++AD+C+GLQGFLVF + VDYGKKSKL F +Y Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKKEDPDHGFSTFFSETGQGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPENLITGKEDASNNYARGHYTVGKEMIDQVLDKVRRMADSCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVY 172
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.110e-54 Identity = 95/169 (56.21%), Postives = 127/169 (75.15%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSV----GACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 H+GQAG+Q+GN+CWELYCLEHGI PDG ++ V +D F TFFSETG G+ VPR+++VDLEP+VID+VRTG Y+ LFHPEQ+++GKEDA+NN+ARGHYTVG+E++D L+R+R++ADNC+GLQGFLVF + ++YGKKS L F++Y Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVY 176 The following BLAST results are available for this feature:
BLAST of FC920904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920904 ID=FC920904; Name=FC920904; organism=Citrus clementina; type=EST; length=663bpback to top |