FC920904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA_GLOLA (Tubulin alpha chain OS=Glomerella lagenarium GN=TUB1 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.128e-49 Identity = 91/165 (55.15%), Postives = 116/165 (70.30%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 H+GQAG Q+GNS WELY LEHG+ DG ++ TFF+ET +G++VPR++FVDL+PS IDE+RTG YRQLFHPE LISGKEDAANN+ARGHYT+G+E+VD +DR+R++ADNC LQGFL+F + +YGKKSKL F +Y Sbjct: 9 HLGQAGTQLGNSAWELYLLEHGLGHDGRPDPSAKDVVDGGSYETFFTETSNGKYVPRSLFVDLDPSPIDEIRTGGYRQLFHPELLISGKEDAANNYARGHYTIGKEMVDNVIDRIRRVADNCHSLQGFLIFHSFGGGTGSGFGALLLERLSTEYGKKSKLEFAVY 173
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA1_CHICK (Tubulin alpha-1 chain (Fragment) OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.899e-48 Identity = 91/132 (68.94%), Postives = 106/132 (80.30%), Query Frame = 2 Query: 266 SVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGF VF + VDYGKKSKL F+IY Sbjct: 2 TIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 133
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.314e-47 Identity = 88/172 (51.16%), Postives = 120/172 (69.77%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPS-------DTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 HIGQAG+Q+G++CWELYCLEHGIQPDG + + V + + +TFF ET +G+HVPR +F+DLEP+VID +R G Y LFHPEQL++GKEDAAN +ARG Y+VG E+++L L+R+RKLA+ C+GLQGFL++ + V+Y KK KL F++Y Sbjct: 8 HIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIRKLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVY 179
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA_ENCCU (Tubulin alpha chain OS=Encephalitozoon cuniculi GN=TUB1 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.112e-46 Identity = 83/165 (50.30%), Postives = 117/165 (70.91%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 HIGQAG+Q+GN+CWELYC EHGI P+G + + ++ +FFS T G +VPR + VDLEP V+D ++TG YR+L+HP QLISGKEDAANN+ARGHYTVG+EI++ ++++R++AD+C GLQGFL++ + ++GKKSKL F++Y Sbjct: 8 HIGQAGVQIGNACWELYCKEHGILPNGQLDQNKMDD---ESAESFFSPTSVGTYVPRTLMVDLEPGVLDSIKTGKYRELYHPGQLISGKEDAANNYARGHYTVGKEIIEPAMEQIRRMADSCDGLQGFLIYHSFGGGTGSGFASLMMDRLAAEFGKKSKLEFSVY 169
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA4_DROME (Tubulin alpha-4 chain OS=Drosophila melanogaster GN=alphaTub67C PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.606e-45 Identity = 90/176 (51.14%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMP---------SDTSVG---ACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 IGQ GIQ+GN+CWELY LEHGI DG++ S SVG + +DA TFF+ETG+G+ VPR++FVDLEP+VID+VR G R+L+HPEQLISGKEDAANN+ARG Y++G+E++D R++K+A+ C LQGFL+F ++ DY KK KL F +Y Sbjct: 9 IGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDA-RTFFTETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVY 183
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA6_NAEGR (Tubulin alpha-6 chain OS=Naegleria gruberi GN=TUBA6 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.167e-44 Identity = 84/165 (50.91%), Postives = 112/165 (67.88%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 HIGQAGIQ G W L C EHGI DGT S ++ G + + FSE G++VPR + VDLEPSV+D VR SY++L+HP Q+I+G+EDAANNFARGHYTVG++++D+ +DR+RK+ADNCT LQGF +F +V V++ KK KL +T+Y Sbjct: 8 HIGQAGIQAGEQVWSLMCAEHGINQDGTRNSTSANG--NSDCSVLFSEGSRGKYVPRNLMVDLEPSVVDSVRNSSYKELYHPAQMITGREDAANNFARGHYTVGKDMLDVTVDRLRKIADNCTSLQGFQIFHSVGGGTGSGFASLLVERLSVEFPKKCKLSYTVY 170
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA1_ENTHI (Tubulin alpha-1 chain OS=Entamoeba histolytica GN=TUB1 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.654e-40 Identity = 81/171 (47.37%), Postives = 111/171 (64.91%), Query Frame = 2 Query: 167 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTS------VGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 +IGQAG Q+GN CWEL+CLEHGIQPDGT ++++ G A+N FF E +G+HVPRA+FVD EP+VIDE++TG Y L+HPE LI GKEDA++NFA+G T +++ +D +RK +NCTGLQGF ++++V Y KK+KL I+ Sbjct: 8 NIGQAGCQLGNKCWELFCLEHGIQPDGTAIANSNEKRSVITGGIDTAYNAFFQELQNGRHVPRAIFVDTEPTVIDEIKTGEYCGLYHPEHLICGKEDASSNFAKGK-TGYEPLLNQTMDAIRKATENCTGLQGFFIYNSVGGGTGSGFTAALCEKLADKYTKKTKLNTVIW 177
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA_ENCHE (Tubulin alpha chain (Fragment) OS=Encephalitozoon hellem GN=TUB1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.237e-38 Identity = 72/150 (48.00%), Postives = 103/150 (68.67%), Query Frame = 2 Query: 212 LYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 LYC EHGI PDG + + ++ +FFS+T G +VPR + VDLEP V++ ++TG YR+L+HP QLISGKEDAANN+ARGHYTVG+EI++ ++++R++ADNC GLQGFL++ + ++GKKSKL F++Y Sbjct: 1 LYCKEHGILPDGRLDQNRMDD---ESAESFFSQTSVGTYVPRTLMVDLEPGVLESIKTGKYRELYHPGQLISGKEDAANNYARGHYTVGKEIIEPVMEQIRRMADNCDGLQGFLIYHSFGGGTGSGFASLMMDRLAAEFGKKSKLEFSVY 147
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBA2_ANEPH (Tubulin alpha-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBA2 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.724e-31 Identity = 67/87 (77.01%), Postives = 70/87 (80.46%), Query Frame = 2 Query: 401 LFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 LFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLDRVRKL+DNCTGLQGFLVF+AV VDYGKKSKLGFTIY Sbjct: 1 LFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIY 87
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB2_PEA (Tubulin beta-2 chain (Fragment) OS=Pisum sativum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.247e-30 Identity = 64/163 (39.26%), Postives = 92/163 (56.44%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 GQ G Q+G WE+ C EHGI P G DT + + N +++E G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD VRK A+NC LQGF V ++ +Y + L F+++ Sbjct: 8 GQCGNQIGAKFWEVVCAEHGIDPTGRYGGDTDLQL--ERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVF 168 The following BLAST results are available for this feature:
BLAST of FC920904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920904 ID=FC920904; Name=FC920904; organism=Citrus clementina; type=EST; length=663bpback to top |