FC920904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_CEPAC (Tubulin beta chain OS=Cephalosporium acremonium GN=TUB2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.940e-24 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ +G + + + + +F+E ++VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDSNGVYNGSSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_ACRCO (Tubulin beta chain OS=Acremonium coenophialum GN=TUB2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.940e-24 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ +G + + + + +F+E ++VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDSNGVYNGTSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB8_PAPHA (Tubulin beta-8 chain OS=Papio hamadryas GN=TUBB8 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.940e-24 Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGF 550 GQ G Q+G WE+ EH I GT D+ + + + +++E G++VPRAV VDLEP +D VR+G + Q+F P+ I G+ A NN+A+GHYT G E+++ +D VRK A++C LQGF Sbjct: 10 GQCGNQIGAKFWEVISDEHAIDSAGTYHGDSRLQL--ERIDVYYNEACGGRYVPRAVLVDLEPGTLDSVRSGPFGQIFRPDSFIFGQCGAGNNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGF 133
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_PENDI (Tubulin beta chain OS=Penicillium digitatum GN=TUB2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ DG + + + N +F+ ++VPRAV VDLEP +D VR+G + +LF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDGDGQYNGTSDLQL--ERMNVYFNHASGDKYVPRAVLVDLEPGTMDAVRSGPFGKLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_METAN (Tubulin beta chain OS=Metarhizium anisopliae PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ +G + + + + +F+E ++VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDSNGVYNGTSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_GIBFU (Tubulin beta chain OS=Gibberella fujikuroi GN=TUB2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ +G + + + + +F+E ++VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDSNGVYNGTSELQL--ERMSVYFNERSGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_CERBT (Tubulin beta chain OS=Cercospora beticola GN=TUB1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24 Identity = 54/128 (42.19%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ G + + + N +F+E ++VPRAV VDLEP +D VR G QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDGSGVYNGTSDLQL--ERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPXGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_PESMI (Tubulin beta chain OS=Pestalotiopsis microspora GN=TUBB PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.013e-23 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ +G + + + + +F+E ++VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDSNGVYNGTSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEACDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_DICDI (Tubulin beta chain OS=Dictyostelium discoideum GN=tubB PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.013e-23 Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACH---DAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 GQ G Q+G+ WE+ EHGIQ DG + N +++E G++VPR+V VDLEP +D ++ Y +LF P+ I G+ A NN+A+GHYT G E+V+ LD VR+ + C LQGF V ++ Sbjct: 10 GQCGNQIGSKFWEVISEEHGIQSDGFHAGGEDEHLKRLQLERINVYYNEARDGKYVPRSVLVDLEPGTVDTIKASPYGKLFRPDNFIHGQSGAGNNWAKGHYTEGVELVESVLDVVRRETEGCDCLQGFQVTHSI 144
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB3_ECHMU (Tubulin beta-3 chain OS=Echinococcus multilocularis GN=TUB-3 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.013e-23 Identity = 53/126 (42.06%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGF 550 GQ G Q+G+ WE EHGI G+ D+ + + N +++E G++VPRA+ +DLEP +D VR+G +LF P+ I G+ A NN+A+GHYT G E+++ LD VRK + C LQGF Sbjct: 10 GQCGNQIGSKFWETISQEHGIDEMGSYHGDSDLQL--ERINVYYNEGQGGKYVPRALLIDLEPGTMDSVRSGPLGKLFRPDNFIFGQSGAGNNWAKGHYTEGAELIEEVLDVVRKECEACDCLQGF 133 The following BLAST results are available for this feature:
BLAST of FC920904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920904 ID=FC920904; Name=FC920904; organism=Citrus clementina; type=EST; length=663bpback to top |