FC920904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB2_COLGR (Tubulin beta-2 chain OS=Colletotrichum graminicola GN=TUB2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.013e-23 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ +G + + + + +F+E ++VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQNISGEHGLDSNGVYNGTSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB2_COLGL (Tubulin beta-2 chain OS=Colletotrichum gloeosporioides GN=TUB2 PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.013e-23 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ +G + + + + +F+E ++VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQNISGEHGLDSNGVYNGTSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB1_CHOCR (Tubulin beta-1 chain OS=Chondrus crispus GN=TUBB PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.013e-23 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 +GQ G QVG WE EHGI DG D H +++E+ SG +VPRA +DLEP V+ ++ QLFHP+ G+ A NN+A+GHYT G E+V+ LD +R+ A+ C LQGF V Sbjct: 10 VGQCGNQVGLKFWEGISAEHGIDVDGKYIGDRPDQELH-RIGVYYNESSSGSYVPRAAMLDLEPGVLMAIKNSKRGQLFHPDNFAYGQSGAGNNWAKGHYTEGAELVETALDIIRREAETCDVLQGFQV 137
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_USTVI (Tubulin beta chain OS=Ustilago violacea PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.728e-23 Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDG--TMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGF 550 GQ G Q+G WE+ EHGI G T SD + + N +++ETG+G++VPRAV VDL+P +D ++ G LF P+ + G+ A NN+A+GHYT G E+VD LD VRK A+ LQGF Sbjct: 10 GQCGNQIGTKFWEVVSEEHGIDGTGQYTGTSDLQL----ERINVYYNETGTGKYVPRAVLVDLKPGTMDVIQGGPLGGLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRKEAEGTDCLQGF 133
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_SCHCO (Tubulin beta chain OS=Schizophyllum commune GN=TUB-2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.728e-23 Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G WE+ EHGI+ DG + + +++E G+ ++VPRA+ VDLEP +D VR+G LF P+ + G+ A NN+A+GHYT G E+VD LD VRK A+ LQGF + Sbjct: 10 GQCGNQIGAKFWEVVSDEHGIEADGLYKGTNDQQL--ERISVYYNEIGANKYVPRAILVDLEPGTMDSVRSGPLGGLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAEGTDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB1_EMENI (Tubulin beta-1 chain OS=Emericella nidulans GN=benA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.728e-23 Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G + W+ EHG+ G + + + N +F+E ++VPRAV VDLEP +D VR G + +LF P+ + G+ A NN+A+GHYT G E+VD +D VR+ A+ C LQGF + Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDGSGVYNGTSDLQL--ERMNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGELFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVVDVVRREAEGCDCLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB1_COLGL (Tubulin beta-1 chain OS=Colletotrichum gloeosporioides GN=TUB1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.728e-23 Identity = 51/125 (40.80%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 182 GIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 G QVG + W+ EHG+ DG +++ + D + +F+E + ++VPRAV VDLEP+ +D +R+G F P+ ++ G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 16 GNQVGTAFWQTIHHEHGLDHDGYFRGESTQQS--DRLSVYFAEASNNKYVPRAVLVDLEPATMDAIRSGPLGNFFRPDNMVHGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAETCDSLQGFQI 138
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.948e-23 Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G Q+G+ WE+ E G+ P +P D+ + + N +++E G++VP A+ +DLEP +D VR G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD VRK A++C LQGF + Sbjct: 10 GQCGNQIGSKFWEVISDEQGVDPPD-IPGDSDLQL--ERINVYYNEATGGRYVP-AILMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGPELIDSVLDVVRKEAESCDCLQGFQI 133
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBBN_GUITH (Tubulin beta chain, nucleomorph OS=Guillardia theta GN=tubB PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.948e-23 Identity = 50/131 (38.17%), Postives = 78/131 (59.54%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTM--PSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 +GQ G Q+G WE+ EHG+ +GT D + + + +++E + VPRAV VDLEP +D VR +Y +LF P+ + G+ A NN+A+GHYT G E+++ +D +RK ++ C LQGF + Sbjct: 9 VGQCGNQIGAKFWEVISHEHGVDTNGTYFGNKDNQI----EKIDVYYNEVSGNRFVPRAVLVDLEPGTMDSVRASNYGRLFRPDNFVFGQSGAGNNWAKGHYTEGAELIESAMDIIRKESEQCECLQGFQI 135
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.948e-23 Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLV 556 GQ G QVG + W+ EHG+ DG + + + +F+E ++VPRAV VDLEP+ +D +R+G F P+ ++ G+ A NN+A+GHYT G E+VD LD VR+ A+ C LQGF + Sbjct: 10 GQCGNQVGTAFWQTIHGEHGLDQDGVFRGSDEQQS--ERLSVYFTEAAKQKYVPRAVLVDLEPATMDAIRSGPLGDFFRPDNMVYGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEACDSLQGFQI 135 The following BLAST results are available for this feature:
BLAST of FC920904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920904 ID=FC920904; Name=FC920904; organism=Citrus clementina; type=EST; length=663bpback to top |