FC920904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.955e-15 Identity = 46/165 (27.88%), Postives = 80/165 (48.48%), Query Frame = 2 Query: 173 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIY 661 GQ G Q+G W+ C EH I +G + ++ + D + FF + +P A+ DLEP VI+ ++T YR L++PE + KE A NN+ G Y+ G ++ + +D + + DN L+GF++ ++ +Y KK F+++ Sbjct: 11 GQCGNQIGVEFWKQLCNEHNIDQEGILKNNNFLN--EDRKDIFFYQADDEHFIPGALLFDLEPRVINSIQTSEYRNLYNPENMFISKEGGGAGNNWGCG-YSQGHKVEEEIIDMIDREVDNSDNLEGFILSHSIAGGTGSGMGSYLLELLNDNYSKKMIQTFSVF 172
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG_ANEPH (Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.955e-15 Identity = 43/135 (31.85%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W+ CLEHGI +G + + G D + FF + ++PRA+ +DLEP VI+ ++ YR L++ E + A NN+A G Y G ++ + +D + + AD L+GF++ ++ Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKEGMLEDFATQGG--DRKDVFFYQADDEHYIPRALLLDLEPRVINGIQNSEYRNLYNHENVFVADHGGGAGNNWASG-YHQGEQVEEDIMDMIDREADGSDSLEGFVLCHSI 141
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG2_HUMAN (Tubulin gamma-2 chain OS=Homo sapiens GN=TUBG2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W+ C EHGI P+G + + G D + FF + ++PRAV +DLEP VI + Y +L++PE + + A NN+A G ++ G +I + D + + AD L+GF++ ++ Sbjct: 10 LGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG2_BOVIN (Tubulin gamma-2 chain OS=Bos taurus GN=TUBG2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W+ C EHGI P+G + + G D + FF + ++PRAV +DLEP VI + Y +L++PE + + A NN+A G ++ G +I + D + + AD L+GF++ ++ Sbjct: 10 LGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG1_HUMAN (Tubulin gamma-1 chain OS=Homo sapiens GN=TUBG1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W+ C EHGI P+G + + G D + FF + ++PRAV +DLEP VI + Y +L++PE + + A NN+A G ++ G +I + D + + AD L+GF++ ++ Sbjct: 10 LGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG1_CANFA (Tubulin gamma-1 chain OS=Canis familiaris GN=TUBG1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W+ C EHGI P+G + + G D + FF + ++PRAV +DLEP VI + Y +L++PE + + A NN+A G ++ G +I + D + + AD L+GF++ ++ Sbjct: 10 LGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG1_BOVIN (Tubulin gamma-1 chain OS=Bos taurus GN=TUBG1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W+ C EHGI P+G + + G D + FF + ++PRAV +DLEP VI + Y +L++PE + + A NN+A G ++ G +I + D + + AD L+GF++ ++ Sbjct: 10 LGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG1_XENLA (Tubulin gamma-1 chain OS=Xenopus laevis GN=tubg1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.040e-15 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W+ C EHGI P+G + + G D + FF + ++PRAV +DLEP VI + Y L++PE + + A NN+A G ++ G +I + D + + AD L+GF++ ++ Sbjct: 10 LGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGT--DRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYANLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSI 141
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG_RETFI (Tubulin gamma chain OS=Reticulomyxa filosa PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.766e-13 Identity = 43/135 (31.85%), Postives = 72/135 (53.33%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W EHGI PDG + + G D + FF + ++PRA+ +DLEP VI+ ++ ++ L++PE + + A NN+A G YT E + +D + + DN L+GF++ ++ Sbjct: 10 VGQCGNQIGTEFWGRLIAEHGIGPDGIVKEFATEGT--DRKDVFFYQADDQHYIPRALLIDLEPRVINSLQESEFKNLWNPENVYIDSQGGGAGNNWAVG-YTHATEKYEHIMDMIDR-EDNSDSLEGFVLTHSI 140
BLAST of FC920904 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 2 Query: 170 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAV 568 +GQ G Q+G W+ C EHGI G + +G D + FF + VPRA+ VDLEP VI + + F E + E A NN+ G Y VG+ + + +D +++ A+ C L+ FL+ ++ Sbjct: 9 VGQCGNQMGAEFWKTLCKEHGISMCGVLQDSRDLG---DRKDVFFYQADDNVFVPRAILVDLEPRVISQAPS-----FFSQESIFLSNEGGGAGNNWGHG-YCVGKAMGNDVIDMIQREAEGCDALETFLLLHSI 134 The following BLAST results are available for this feature:
BLAST of FC920904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 403
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920904 ID=FC920904; Name=FC920904; organism=Citrus clementina; type=EST; length=663bpback to top |